Transcription Factor
| Accessions: | T008622_1.02 (CISBP 1.02) |
| Names: | BRADI5G22430, T008622_1.02; |
| Organisms: | Brachypodium distachyon |
| Libraries: | CISBP 1.02 1 1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed] |
| Notes: | experiment type:PBM, family:AT hook |
| Length: | 405 |
| Pfam Domains: | 26-35 AT hook motif 101-107 AT hook motif |
| Sequence: (in bold interface residues) | 1 MTSEGNKATAPSDQPPIEQLVSSGAKRKRGRPRKYEHSTYEQPQMAHPVRSMSPGRRVLY 60 61 NYNMHHGGVHANHTSGGSVGPKMHTVYVLPAPKAQGDRSSRPRNSANTVKVHDNQATNYS 120 121 SAHVEGNSSTDANIGKRFVGKMANKCPGFSLITVKVKDNQVLQGWIPDVNNLRPITPRDD 180 181 LVPELPMLRPSSVKKKKASAVHKQAPPPLPVHLEDVTIARPLQMRRPVEKSIATNIIPTT 240 241 PGVYISPGVVAAAPVSVPSSYVESWPLPKQVTGPIRPEPSATVVPVKFAQPVSISCRQVA 300 301 NEDVLVEGKSVTEATSDSESSNGSDESSAQIQRVDPAAINEIDITSGSKVQSDASDNNQH 360 361 IYNMEQSEQPQTETNILKGVDGSNLGASDDAHSVNEEDAMKVDSK |
| Interface Residues: | 168, 171, 173 |
| 3D-footprint Homologues: | 2pyl_A |
| Binding Motifs: | M0121_1.02 rsawwwwar |
| Related annotations: | PaperBLAST |
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