Transcription Factor

						

			
Accessions: T078805_1.02 (CISBP 1.02)

			
Names: Ets96B, T078805_1.02;
Organisms: Drosophila melanogaster
Libraries: CISBP 1.02 1
1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed]
Notes: experiment type:B1H, family:Ets
Length: 640
Pfam Domains:   498-580 Ets-domain
Sequence: 
(in bold interface residues)		   1 MTISWRALSHFLIPQSDYGEAKTHLEQLQQTLTHLDHPHHHHAHHPHHHLGLYHGALPNT   60
  61 STITTDSVVSCVSSTLPAVAKAISASSSCDGLQSERKKCPISDLDSGGHGHGQGHGLMEA  120
 121 ICAGQKTSPIPPPPPPCCLTLGESSSSPNPIATAALMNASTSGSSSAGGASASLCNDLTR  180
 181 ESSWYAHHHHHHHHHHHQLPDELVMYATPTPTPAIGKFGLDTSTEGYLNARYNVNVKGVR  240
 241 HDRTSSFFDIPAVTHPHNHPHPHPHPHPHPYCYRFPSSPPAGILKKSDEEATSAAVYCSD  300
 301 VSSGQHFPHHTKIEHADSTTTAAQQQQQQQEQQQQQQQQQQQQQHQQQLQQAAALHPHHH  360
 361 HSHHGHHGHQQAEQQALTHLTPLHAASAFKFSHTAVISSSAVYATPSHYAHQQQTQSQSV  420
 421 YRDLSPTTLAAVSDADLKYDSGPYNAAISSTYPSALRPNVVDSTTSSDAELRLDQFYASN  480
 481 GISTSSNGQAISQRRGSLQLWQFLVALLDEPTTSASCIAWTGRGMEFKLIEPEEVARRWG  540
 541 LQKNRPAMNYDKLSRSLRYYYEKGIMQKVNGERYVYRFVCDPDALFNMAYGHLTTGSGKG  600
 601 DQHQLTLSLAKTPPTSGDSQTQSPRVAKSEYYDTAALHKY
Interface Residues: 551, 552, 554, 555, 556, 558, 559, 573
3D-footprint Homologues: 3jtg_A, 1dux_F, 8ee9_F, 3zp5_A, 4mhg_A, 8smh_F, 4uno_A, 2stt_A, 8smj_F, 7jsa_J, 4lg0_B, 1yo5_C, 4iri_A, 1awc_A, 4l18_B, 1bc8_C
Binding Motifs: M4952_1.02 aCCGGAAGyrv
			
Related annotations: PaperBLAST

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.