Transcription Factor
| Accessions: | Carub.0008s2269.1.p (EEADannot 2026-03-04) |
| Names: | ARF2 |
| Organisms: | Capsella rubella |
| Libraries: | EEADannot 2026-03-04 1 1 Contreras-Moreira B, Sebastian A. FootprintDB: Analysis of Plant Cis-Regulatory Elements, Transcription Factors, and Binding Interfaces. Methods Mol Biol 1482:259-77 (2016) [Pubmed] |
| Notes: | family:B3 ARF |
| Length: | 875 |
| Pfam Domains: | 164-265 B3 DNA binding domain 290-372 Auxin response factor 657-839 AUX/IAA family |
| Sequence: (in bold interface residues) | 1 MASSEVSMKGNRGGDNFSSSGYTDPKETRNVSVAGDGQISHSNRSVAAERAVDPEAALYR 60 61 ELWHACAGPLVTVPRQDDRVFYFPQGHIEQVEASTNQAAEQQMPLYDLPSKLLCRVINVD 120 121 LKAEADTDEVYAQITLLPEANQDENAIEKEAPPPPPPRFQVHSFCKTLTASDTSTHGGFS 180 181 VLRRHADECLPPLDMSRQPPTQELVAKDLHANEWRFRHIFRGQPRRHLLQSGWSVFVSSK 240 241 RLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAISTGTMF 300 301 TVYYKPRTSPSEFIVPFDQYMESVKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGTEESDP 360 361 TRWPKSKWRSLKVRWDETSSIPRPDRVSPWKIEPALAPPALSPVPMPRPKRPRSNIAPSS 420 421 PDSSMLTKDGTAKANMDPLPASGLSRVLQGQEYSTLRTKHIENVECDAPENSVVWQSSTD 480 481 DDKVDVVSASKRYGSENWMSSARHEPTYTDLLSGFGNNIDPPHGQRIPFYDHSSSPSMPA 540 541 KKILSDPEGKFDYLANQWQMMHSGLSLKLHESPKAPAASDSSFQGLGNGKYSEYPVLNGL 600 601 STENGGGNWPIRPRALNYFEEVVQAQAQAQAQAQAQAQAQAQAQAQARDQVTKQPMTIQE 660 661 EGAKSRDGNCRLFGIPLINNMNGTDSSMSQRNNLNDAVGFTQVASAKVQDLSDQSKGSKT 720 721 TNDHREQGRPLPTSNPHPKDAQTKTNSSRSCTKVHKQGIALGRSVDLSKFQNYEELIAEL 780 781 DRLFEFNGELMAPKKDWLIVYTDDENDMMLVGDDPWQEFCCMVRKIFIYTKEEVRKMNPG 840 841 TLSCRSEEEVVVGEGSDAKDAKSASNPSLSSAGNS |
| Interface Residues: | 171, 176, 177, 178, 180, 221, 223, 224, 226, 854 |
| 3D-footprint Homologues: | 6ycq_A, 7et6_A, 8oj2_A, 4m8b_R |
| Binding Motifs: | EEAD0620 tTGTCGSswwwwmrssrACA |
| Related annotations: | PaperBLAST |
Disclaimer and license
These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.