Transcription Factor
| Accessions: | AN1 (EEADannot 2025-01-07) |
| Names: | Os04t0350700-01 |
| Organisms: | Oryza sativa |
| Libraries: | EEADannot 2025-01-07 1 1 Contreras-Moreira B, Sebastian A. FootprintDB: Analysis of Plant Cis-Regulatory Elements, Transcription Factors, and Binding Interfaces. Methods Mol Biol 1482:259-77 (2016) [Pubmed] |
| Notes: | family:bHLH |
| Length: | 263 |
| Pfam Domains: | 91-138 Helix-loop-helix DNA-binding domain |
| Sequence: (in bold interface residues) | 1 MNPTTAAAADQPSKPSAAAAARKRKSSAKPKASSSSLPTATATTNASPKRSKVAAGAGDD 60 61 GDADADAAEEKPEPAKDYIHVRARRGQATDSHSLAERVRRERISERMKLLQSLVPGCNKI 120 121 TGKALMLDEIINYVQSLQRQVEFLSMKLATMNPQLDFDSHYMPSKDMSHMPVPAYPSSDP 180 181 TTTTAFSYTGSPATADPFTVYNCWELDLHTAMQMGATTGLSQDGPIATMAPSPSPLPHHP 240 241 PLHGFYGGQQQQGTTVNHMKAEP |
| Interface Residues: | 92, 93, 95, 96, 99, 100, 123 |
| 3D-footprint Homologues: | 7ssa_L, 7xi3_A, 5v0l_A, 8ia3_B, 7d8t_A, 8osl_O, 8osl_P |
| Binding Motifs: | EEAD0066 GCGCATGT |
| Related annotations: | PaperBLAST |
Disclaimer and license
These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.