Transcription Factor
| Accessions: | Q9VFQ3 (JASPAR 2024) |
| Names: | E5, FI01131p, Q9VFQ3_DROME |
| Organisms: | Drosophila melanogaster |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Uniprot: | Q9VFQ3 |
| Length: | 524 |
| Pfam Domains: | 304-360 Homeobox domain |
| Sequence: (in bold interface residues) | 1 MVTCGRQTFNMLPMAPTSPFVSSSSSVAASSTSVSASSTVSASASSKPKLAFSIDSIVGE 60 61 SSTRSAPLRVSVISSPPPRSESPASPTNTNNSGRRTPRGYIYCRRRDSLDRSRSPQRSPV 120 121 SRSPSPPNAGGNPAAAGNTAKSGDPSSGTGNPPTLIRPLPLPAPNLALIGNRTSPNAMAV 180 181 RMAGPPHPPSQPPPFLAAQFQMAAALAHHHQQQQQQQQQQLPPVPTGPPHGPHPHLPPGQ 240 241 IPLGIFPGGPHPGHPPPHGHHPFGSAPHLIRDSYPLYPWLLSRHGRIFPRFPGNFLFQPF 300 301 RKPKRVRTAFSPTQLLKLEHAFEGNHYVVGAERKQLAQGLSLTETQVKVWFQNRRTKHKR 360 361 MQQEGGDGSDTKSNKGSSSGGGGGGDGEDDAKHDGSQHSYEDAEDPEDEDEIEEDDEDEV 420 421 IDMDDYGSEMDAEEHQRLREQFQQQLAQHQQQFMQQNAGEAATLSPQQQHQLLQQHQQHL 480 481 QQQHHQQQQHFIQQQQQLYLREREREREREREREREKSRERENQ |
| Interface Residues: | 301, 303, 304, 305, 306, 307, 345, 346, 348, 349, 352, 353, 356, 357, 360 |
| 3D-footprint Homologues: | 1ig7_A, 3d1n_M, 3cmy_A, 5zfz_A, 1fjl_B, 2h1k_B, 1puf_A, 6a8r_A, 1jgg_B, 1nk2_P, 1zq3_P, 6m3d_C, 3lnq_A, 2lkx_A, 7q3o_C, 6es3_K, 2ld5_A, 2hdd_A, 5jlw_D, 3rkq_B, 2r5y_A, 4xrs_G, 2hos_A, 4cyc_A, 1au7_A, 5flv_I, 3l1p_A, 5zjt_E, 3a01_E, 7psx_B, 1b72_A, 5hod_A, 7xrc_C, 1e3o_C, 2xsd_C, 1le8_A, 1mnm_C, 1du0_A, 1puf_B, 1k61_B, 1o4x_A, 8g87_X, 4qtr_D, 4xrm_B |
| Binding Motifs: | MA0189.1 yTAATkA MA0189.2 TAATkA |
| Binding Sites: | MA0189.2.12 / MA0189.2.2 MA0189.1.9 MA0189.1.1 MA0189.1.10 MA0189.1.11 MA0189.1.12 MA0189.1.13 MA0189.1.14 MA0189.1.15 MA0189.1.16 MA0189.1.17 MA0189.1.18 MA0189.1.19 MA0189.1.2 MA0189.1.20 MA0189.1.3 MA0189.1.4 MA0189.1.5 MA0189.1.6 MA0189.1.7 MA0189.1.8 MA0189.2.1 / MA0189.2.9 MA0189.2.20 MA0189.2.10 MA0189.2.11 MA0189.2.13 MA0189.2.14 MA0189.2.15 MA0189.2.16 / MA0189.2.6 MA0189.2.17 MA0189.2.18 MA0189.2.19 MA0189.2.3 MA0189.2.4 MA0189.2.5 MA0189.2.7 MA0189.2.8 |
| Publications: | Noyes M.B, Meng X, Wakabayashi A, Sinha S, Brodsky M.H, Wolfe S.A. A systematic characterization of factors that regulate Drosophila segmentation via a bacterial one-hybrid system. Nucleic acids research 36:2547-60 (2008). [Pubmed] |
| Related annotations: | PaperBLAST |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.