Transcription Factor
| Accessions: | UP00438A (UniPROBE 20160601) |
| Names: | None, PF14_0079, putative, transcription factor with AP2 domain(s) |
| Organisms: | Plasmodium falciparum |
| Libraries: | UniPROBE 20160601 1 1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed] |
| Description: | transcription factor with AP2 domain(s), putative: putative Plasmodium falciparum transcription factor, AP2 domain |
| Length: | 63 |
| Pfam Domains: | 1-59 AP2 domain |
| Sequence: (in bold interface residues) | 1 TGVSGVYFEKSRSSWTAQYKVSGGKRRAKRFLVTKNMSYEEIENVKQQCIAYRKQMEREY 60 61 IKE |
| Interface Residues: | 28, 30, 48, 57, 58, 59, 60 |
| 3D-footprint Homologues: | 1nk2_P, 3s8q_A |
| Binding Motifs: | UP00438A_1 awbwyawcTGChACCAmatmagv |
| Binding Sites: | GGGTGGCA GGTGGCAA GGTGGCAC ACAACCAA ATGCAACC CGCAACCA CGGTGGCA CGGTTGCA CTGCAACC CTGCCACC CTGCTACC GCAACCAC GCTACCAC GGGTAGCA GGTAGCAA GGTTGCAA TACAACCA TGCAACCA TGCCACCA TGCTACCA |
| Publications: | Campbell TL, De Silva EK, Olszewski KL, Elemento O, Llinás M. Identification and genome-wide prediction of DNA binding specificities for the ApiAP2 family of regulators from the malaria parasite. PLoS Pathog : (2010). [Pubmed] |
| Related annotations: | PaperBLAST |
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