Transcription Factor
| Accessions: | O08792 (JASPAR 2024) |
| Names: | COE2_MOUSE, Early B-cell factor 2, EBF-2, MET-mesencephalon-olfactory TF1, MET-mesencephalon-olfactory transcription factor 1, Metencephalon-mesencephalon-olfactory transcription factor 1, O/E-3, OE-3, Olf-1/EBF-like 3, Transcription factor COE2 |
| Organisms: | Mus musculus |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Uniprot: | O08792 |
| Length: | 575 |
| Pfam Domains: | 253-335 IPT/TIG domain |
| Sequence: (in bold interface residues) | 1 MFGIQDTLGRGPALKDKSLGAEMDSVRSWVRNVGVVDANVAAQSGVALSRAHFEKQPPSN 60 61 LRKSNFFHFVLALYDRQGQPVEIERTAFVDFVENDKEQGNEKTNNGTHYKLQLLYSNGVR 120 121 TEQDLYVRLIDSVTKQPIAYEGQNKNPEMCRVLLTHEVMCSRCCEKKSCGNRNETPSDPV 180 181 IIDRFFLKFFLKCNQNCLKTAGNPRDMRRFQVVLSTTVNVDGHVLAVSDNMFVHNNSKHG 240 241 RRARRLDPSEATPCIKAISPSEGWTTGGAMVIIIGDNFFDGLQVVFGTMLVWSELITPHA 300 301 IRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFIYTALNEPTIDYGFQRLQKVIPRHPGD 360 361 PERLAKEMLLKRAADLVEALYGTPHNNQDIILKRAADIAEALYSVPRNPSQIPALSSSPA 420 421 HSGMMGINSYGSQLGVSISESTQGNNQGYIRNTSSISPRGYSSSSTPQQSNYSTSSNSMN 480 481 GYSNVPMANLGVPGSPGFLNGSPTGSPYGIMSSSPTVGSSSTSSILPFSSSVFPAVKQKS 540 541 AFAPVIRPQGSPSPACSSGNGNGFRAMTGLVVPPM |
| Interface Residues: | 62, 64, 65, 162, 171, 201, 203, 235, 236, 237, 238, 340 |
| 3D-footprint Homologues: | 3mlp_F, 3mln_A, 2ypa_A |
| Binding Motifs: | MA1604.1 kyCCCAAGGGAvh MA1604.2 CCCAAGGGA |
| Binding Sites: | MA1604.1.1 MA1604.1.10 MA1604.1.11 / MA1604.1.7 MA1604.1.12 / MA1604.1.8 MA1604.1.13 MA1604.1.14 MA1604.1.15 MA1604.1.16 MA1604.1.17 / MA1604.1.9 MA1604.1.18 MA1604.1.19 MA1604.1.2 MA1604.1.20 MA1604.1.3 MA1604.1.4 MA1604.1.5 MA1604.1.6 MA1604.1.7 MA1604.1.6 / MA1604.1.8 MA1604.1.9 MA1604.1.10 MA1604.1.11 MA1604.1.12 MA1604.1.13 MA1604.1.14 MA1604.1.15 MA1604.1.16 MA1604.1.17 MA1604.1.18 MA1604.1.19 MA1604.1.20 MA1604.1.4 MA1604.2.1 / MA1604.2.12 / MA1604.2.13 / MA1604.2.2 MA1604.2.10 / MA1604.2.15 / MA1604.2.3 / MA1604.2.5 MA1604.2.11 / MA1604.2.6 / MA1604.2.9 MA1604.2.14 MA1604.2.16 / MA1604.2.17 / MA1604.2.18 / MA1604.2.7 MA1604.2.19 / MA1604.2.20 MA1604.2.4 MA1604.2.8 |
| Publications: | Rajakumari S, Wu J, Ishibashi J, Lim HW, Giang AH, Won KJ, Reed RR, Seale P. EBF2 determines and maintains brown adipocyte identity. Cell Metab 17:562-74 (2013). [Pubmed] |
| Related annotations: | PaperBLAST |
Disclaimer and license
These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.