Transcription Factor
| Accessions: | T148806_1.02 (CISBP 1.02) |
| Names: | LOC_Os03g25430, T148806_1.02; |
| Organisms: | Oryza sativa |
| Libraries: | CISBP 1.02 1 1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed] |
| Notes: | experiment type:PBM, family:Storekeeper |
| Length: | 377 |
| Pfam Domains: | 82-181 Protein of unknown function, DUF573 |
| Sequence: (in bold interface residues) | 1 MLPTVVDDPSAAAAAAVGAAASSSFPDADVYGNGDSDDIDFPSDPNHATTQAFSSAAAAA 60 61 AAAGPGGGGGAGSGSGGERRPLFQRLWTEEDEIVILRAFAEFTAQRGTAFASHQYDTDPF 120 121 YEDMRRRLQLDFSKSQLVEKLRRLKRKYRNCVDRLRATGQSFSFRSPHEQAIFEIARGIW 180 181 RPTSDKHGRDADSDDDALPDAAAAVAVPAPANGEVRSPSSTRAQQRRGRRRRTAAAAAAT 240 241 ATAADASEPPQPYPPAPAPAPVKAEDALPHFFPQGAAVTATAHVHGVDPASAAASAAANA 300 301 EGGILAPLFKEMVRAMLTAGMAPPSLEPPAPGIPMKGERWRQQRILELEVYLRRIDLLQD 360 361 QVRTALEELKSTPPATQ |
| Interface Residues: | 16, 20, 26, 143, 211, 212, 215, 229, 232 |
| 3D-footprint Homologues: | 2vw9_A, 2ayg_A, 5zfz_A |
| Binding Motifs: | M1621_1.02 hcssrcccr |
| Related annotations: | PaperBLAST |
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