Transcription Factor
| Accessions: | T099790_1.02 (CISBP 1.02) |
| Names: | NCU03266, T099790_1.02; |
| Organisms: | Neurospora crassa |
| Libraries: | CISBP 1.02 1 1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed] |
| Notes: | experiment type:PBM, family:Homeodomain |
| Length: | 671 |
| Pfam Domains: | 70-125 Homeobox domain |
| Sequence: (in bold interface residues) | 1 MDTLAPTPSTPSPQLSSAVPGLAHEVEHEELSQSTSQNQVFESPLLRESQTPAPQLSSQL 60 61 SGEVERHPKGKRKRTTAKDKAILEAAYNANPKPDKAARQDIVNRVSLNEKEVQIWFQNRR 120 121 QNDRRKSRPLSPQEIAALRYGGMQILSSDNTLPVYTSEPENTSPIQVVSSLDQEYSSPRE 180 181 VASPSKLDDHETEQNHEDTLHEDTLPLPEPQSQPQEEQQSLPHPVYATPAQKQRHAGDDD 240 241 SLLMSQHLPSSVGYLSNRWNYPAHSHVLSTPISFDRGDDSFNNFPPSSCSSSTSALRPRL 300 301 STGLDGKAEVITSPPQNPASLPPSELQSFDSACRPSYQRGPSESPVTLPPISTITSSLPS 360 361 SQNAAPLLPRLARGRSRDVHAWEFACDAENCEDALTVQAKHESRGSAIAAISLLRSTTSS 420 421 TAGGSPLQLSRSNKRNASISRMTPRADSSTKKPRLTKGLDATGRLETPNNNNTWAGKRQS 480 481 FTADTPADFSHNTKPKSSSLFISPQGNESDKENWSPDENGNPRFSYHPPSSAIRPTNRRL 540 541 LPSGPLSSSIHDKATNPRRTPARHALIESSPSFSLSGNRTNTGPLDGGGRGQHYRGGDKR 600 601 GGGGSELRIYEDFVVATTEHNTPTASRRAPPFEDDGSDEVERFMRGEISPSKKGDADAVA 660 661 GLLSLSQGNWR |
| Interface Residues: | 32, 33, 34, 37, 38, 48, 52, 57, 69, 71, 72, 73, 74, 75, 110, 111, 113, 114, 117, 118, 121, 122, 125 |
| 3D-footprint Homologues: | 1au7_A, 5zfz_A, 1puf_A, 2h1k_B, 1fjl_B, 6a8r_A, 3cmy_A, 3d1n_M, 5zjt_E, 3lnq_A, 2lkx_A, 2hdd_A, 1b72_A, 2hos_A, 4cyc_A, 2ld5_A, 1nk2_P, 3l1p_A, 1k61_B, 5hod_A, 1mnm_C, 5jlw_D, 1e3o_C, 4j19_B, 7q3o_C, 7xrc_C, 1ig7_A, 2xsd_C, 1zq3_P, 1jgg_B, 7psx_B, 5flv_I, 1o4x_A, 3a01_E, 4qtr_D, 3rkq_B, 2r5y_A, 1puf_B, 6es3_K, 4xrs_G, 8g87_X, 1du0_A |
| Binding Motifs: | M1113_1.02 sktwaAktrs |
| Related annotations: | PaperBLAST |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.