Transcription Factor
| Accessions: | T136615_1.02 (CISBP 1.02) |
| Names: | nasonia_NCBI_hmm1312624, T136615_1.02; |
| Organisms: | Nasonia vitripennis |
| Libraries: | CISBP 1.02 1 1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed] |
| Notes: | experiment type:PBM, family:Pipsqueak |
| Length: | 1161 |
| Pfam Domains: | 361-403 helix-turn-helix, Psq domain |
| Sequence: | MSKLLNSWPTNLARLEADEKELSGAEEEKEVEKALLKPLLSLEDLVRFSSLEGSGGESLR QLLQRGQDTGAAEWSAFEHANIGPYIQKMLAAASPFNKVFIDAAGLESQDYRIPEVMRRL MCEDKKLSKEANVNGDQVQHIHQVSLQHRLPQSGQRAPMTNDDFNPAIEEEASDSGQGRP ILKIPSYKPASSTTPGPSKNGAEPNAAATAFAQSFAAAAAAAANAVAGSPGLLERASPAF SGTSSPTNSLVGKGMAVNFRDVIAKSISVKFQEGQQPTGMPGQGGQSSQSMIAEPNPYKR GRYTPPQQSQQGGGQHSAHQQSQQSKNAAQQQAQQDKNQNKSGAGGKGTRPKRGKYRNYD RDSLVEAVRAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKRDQKQPDDKAKEPT ATGAAIRTTPAATPEKKPLLKPQKPFTPAAGAGGMPGPNGLKMPPFMEGMPPMAFGHPFN FWGPTPFMPSPFIPGGPNVPGILPEQYFASQRMRGLQEQQRNAIVQQQQRDSATAEQPGT SNSRGTSLIKSPREMAESLYDGTAANGSFLDNLIRSSLEPGAARSNASSQQATQQQPENM GGSKVLIDQLCRNSRRTPLPRAMQQDSSEDEAPVGYKAARPLPERPERVPTVDLSPSPSE RARATDEGSDRGLASPPTPLSLSRLSGSGREDETTRDSRSSREREVQNGGGSDKSEERQD SSTKKLNHYPEIHNLYAVSTDKKSACDSKLIVDHSSQKTQQHKDNFAAAAGAAVGLASQL QRSGYNNMNSSGTAAAGNGHTRPTTPCNNQSSSERADSPQEQVSSPQPPSPAQAQLVLME ETISTSSRATAEAINFGQSIQQLIVNKVVTDKSDIDDDVIKLLAEFLDVRDYKTNLVSSW LLRTIAEQIISASNEISTHDYSTFVLWLHEEINLVFDSPDVQREQFFELMSNLFYQTLSE ILNGKGVLLPSQLLYHETKIDTEFAESISSTSGSDDKNALVIIAKSDREQVEDESFERKS LELINLDEQLLNVIIESTYQIFGTKLNYTLIRAACENQKDIVYYTIPYHFRNPRIVQKFE ISRQASTASNPKNEKMKKRKSSKKSFIEEMTEITKLISVFDINQFRFILPLSEALEADNV MYTRKNSEIETNSNSSNVIKT |
| Binding Motifs: | M1502_1.02 awwTTmggsw |
| Related annotations: | PaperBLAST |
Disclaimer and license
These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.