Transcription Factor

						

			
Accessions: 6c2s_A (3D-footprint 20231221), 6c2s_C (3D-footprint 20231221), 6c2s_D (3D-footprint 20231221)

			
Names: Q6N8V9_RHOPA, Transcriptional regulator, MarR family
Organisms: Rhodopseudomonas palustris, strain ATCC BAA-98 / CGA009
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Uniprot: Q6N8V9
Length: 142
Pfam Domains:     35-93 MarR family
    36-93 MarR family
   36-102 Winged helix DNA-binding domain
Sequence: 
(in bold interface residues)		   1 SELKMGELSELLGYALKRAQLRVFEDFLHCVAPVQLTPAQFSVLLLLDANPGRNQTEIAT   60
  61 TLGILRPNFVAMLDALEGRGLCVRTRSPSDRRSHILMLTDKGRATLARAKKLVATRHEDR  120
 121 LTELLGRDNRDALLSMLATIAR
Interface Residues: 56, 61, 62, 64, 65, 66, 67, 68, 70, 71, 72, 75, 92
3D-footprint Homologues: 7el3_B, 6jbx_A, 1z9c_A, 5yi2_J, 3q5f_A, 5h3r_A, 6c2s_C, 4aik_A, 4fx4_B, 3zpl_B, 5hlg_E, 5hso_A
Binding Motifs: 6c2s_AD ATnnTTATAnnnTATAAnnAT
6c2s_C ATnnTTATA
Binding Sites: 6c2s_U / 6c2s_X
6c2s_V / 6c2s_Y
			
Publications: Cogan DP, Baraquet C, Harwood CS, Nair SK. Structural basis of transcriptional regulation by CouR, a repressor of coumarate catabolism, in Rhodopseudomonas palustris. J Biol Chem 293:11727-11735 (2018). [Pubmed]
Related annotations: PaperBLAST

	
			


			

				

				
				
				
				

			

			

		

	
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