Transcription Factor

						

			
Accessions: AtMYB54 (AthaMYB 1.0)

			
Names: At1g73410, AtMYB54, Myb domain protein 54, MYB transcription factor, Myb-like transcription factor, putative, Putative uncharacterized protein At1g73410
Organisms: Arabidopsis thaliana
Libraries: AthaMYB 1.0 1
1 Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). [Pubmed]
Uniprot: Q9FX36
Length: 244
Pfam Domains:      6-51 Myb-like DNA-binding domain
     9-69 Myb-like DNA-binding domain
   58-101 Myb-like DNA-binding domain
   61-106 Myb-like DNA-binding domain
Sequence: 
(in bold interface residues)		   1 MIMCSRGHWRPAEDEKLKDLVEQYGPHNWNAIALKLPGRSGKSCRLRWFNQLDPRINRNP   60
  61 FTEEEEERLLAAHRIHGNRWSIIARLFPGRTDNAVKNHWHVIMARRTRQTSKPRLLPSTT  120
 121 SSSSLMASEQIMMSSGGYNHNYSSDDRKKIFPADFINFPYKFSHINHLHFLKEFFTGKIA  180
 181 LNHKANQSKKPMEFYNFLQVNTDSNKSEIIDQDSGQSKRSDSDTKHESHVPFFDFLSVGN  240
 241 SAS*
Interface Residues: 6, 40, 41, 42, 43, 45, 46, 50, 51, 92, 93, 96, 97, 100, 101, 102
3D-footprint Homologues: 1w0t_A, 7c4r_A, 2kdz_A, 7xur_A, 5eyb_B, 1vfc_A, 3zqc_A, 6kks_A, 1mse_C, 3osg_A
Binding Motifs: AtMYB54_I wwmaGTTr
AtMYB54_II rsTwGTTr
Binding Sites: AAAAGTTA
ACAAGTTA
AGTAGTTA
ATTAGTTG
GCTTGTTG
GTCAGTTA
TACTGTTG
TGCGGTTG
			
Publications: Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). [Pubmed]
Related annotations: PaperBLAST

	
			


			

				

				
				
				
				

			

			

		

	
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