Transcription Factor
| Accessions: | UP00280A (UniPROBE 20160601) |
| Names: | Disrupter of telomere silencing protein 6, Pbf2, YER088C |
| Organisms: | Saccharomyces cerevisiae |
| Libraries: | UniPROBE 20160601 1 1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed] |
| Uniprot: | P40059 |
| Description: | Protein of unknown function, involved in telomeric gene silencing and filamentation |
| Length: | 146 |
| Pfam Domains: | 53-96 Myb-like DNA-binding domain 54-97 Myb-like DNA-binding domain |
| Sequence: (in bold interface residues) | 1 QLHSLTRQPHSSSTAMSKNEAQESSPSLPASSSSSTSASASASSKNSSKNPSSWDPQDDL 60 61 LLRHLKEVKKMGWKDISQYFPNRTPNACQFRWRRLKSGNLKSNKTALIDINTYTGPLKIT 120 121 HGDETANAQQKPSKKVEENVLTEDTA |
| Interface Residues: | 85, 86, 87, 89, 90, 93, 95 |
| 3D-footprint Homologues: | 1mse_C, 2kdz_A, 3osg_A, 1ign_A, 3zqc_A |
| Binding Motifs: | UP00280A_1 wbybkcwsCTCATCGcvycyt |
| Binding Sites: | ACTCATCG CCCATCGC CCGATGAG CCGATGCC CCTCATCG CGATGACC CGATGAGA CGATGAGC CGCATCGC CTCATCGA CTCATCGC CTCATCTC GCGATGAC GCGATGCC GGCGATGA TCATCGCA AGCGATGC CATCGATG GCCATCGC GTCATCGA |
| Publications: | *Zhu C, *Byers K, *McCord RP, Shi Z, Berger MF, Newburger D, Saulrieta K, Smith Z, Shah M, Radhakrishnan M, Philippakis AA, Hu Y, De Masi F, Pacek M, Rolfs A , Murthy TVS, LaBaer J, Bulyk ML. High-Resolution DNA Binding Specificity Analysis of Yeast Transcription Factors. Genome Research. Epub January 21, 2009, doi:10.1101/gr.090233.108 (*co-1st authors). [Pubmed] |
| Related annotations: | PaperBLAST |
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