Transcription Factor
| Accessions: | T155501_1.02 (CISBP 1.02) |
| Names: | fgenesh1_pg.C_Chr_11.0001000193, T155501_1.02; |
| Organisms: | Ostreococcus tauri |
| Libraries: | CISBP 1.02 1 1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed] |
| Notes: | experiment type:PBM, family:WRKY |
| Length: | 468 |
| Pfam Domains: | 31-95 WRKY DNA -binding domain |
| Sequence: (in bold interface residues) | 1 MTTSDRSRSSADAENEAPEERPTPHNAHAHEDGYRWRKYGQKNIKGSRHPRSYYRCTERG 60 61 CPARKKTELASDDESDEDEGDRMRVTYEGVHTHPKPSRGRGPSMLMSMEPLCIAATPERA 120 121 TSGTSSGTVFGRRRGREEGQTEREKRKFHEFSIKSESLETPKKRRKESPAAKTTPRSRTT 180 181 PQSKTPPRQTPSRPNRSRASGSRSRQRERRESSCSAQNAGRSSSYRAKKPMKQPVNPTLM 240 241 SDMMTCFNEYVTNSEQWTANGHIGGHVAPFKSSALEYEHHRRPVVPPPPQERSLSDRLFD 300 301 WLPLSPLSPTWPSWPFGDADLEAKLLRSTPARENQAVEYNHDHRGNVCSSGLRRERSFED 360 361 LRPPALTVADEPTALTHDERRPDWSLGEYLRSPFESIISSTPLLATLTKTMRSWCESPSA 420 421 AAQALSPLGQGRDFARPPGFVARRRARSETLHPDSLYTASLRSPFRAF |
| Interface Residues: | 37, 38, 39, 41, 42, 53 |
| 3D-footprint Homologues: | 6j4g_B, 6ir8_A, 6j4e_B, 6j4f_F, 7z0u_A |
| Binding Motifs: | M1704_1.02 yrGTCAamg |
| Related annotations: | PaperBLAST |
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