Transcription Factor

						

			
Accessions: T158445_1.02 (CISBP 1.02)

			
Names: PGTG_09159, T158445_1.02;
Organisms: Puccinia graminis
Libraries: CISBP 1.02 1
1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed]
Notes: experiment type:PBM, family:Zinc cluster
Length: 507
Pfam Domains:    87-120 Fungal Zn(2)-Cys(6) binuclear cluster domain
  297-352 PAS fold
Sequence: 
(in bold interface residues)		   1 MVAEVSTAAIQPHQYHHLNPSLLSTNRLLPQILTNTGRSSCASSSSSSSCGSSPATTHTS   60
  61 ADSWNLKPQTITCKPNPPPARRKKASRACGHCQKAHLTCDDGRPCLRCTKRGLSKTCTDG  120
 121 VRKKAKYLSDYDDALLVRPRPSIKRASEDPLEVEDCKKVKVATDDRDCRLSISWADLDLL  180
 181 ENVGIPQYPNVETSVLAGCETVGSANPTSQTWALGGLEEWLARFESGVSPSSSAALDNLI  240
 241 SLQENVKQADQTSESRQRMQEWVTRINRLVEIRKLTMNITADDEWMLKRNLDRSLMELER  300
 301 IISLSGTPTMIWNTSGQILKVGDEFCMLTEWSREDLVGKHIETVFEPESLEEYLDMVESS  360
 361 IFPDQESNHHPSRPRSQGSKTSSRNLPQRSSSSASSSSMTSSPSLSSIPLIALSQASDSN  420
 421 LSRGPYSNDRPDLTSSFAQSKTSNQSYGERECKETIKWFGIRKACGRESIGCSFCFKVRK  480
 481 DLFDCPSTIIGNFLPILTRASYTDHSS
Interface Residues: 84, 95, 96, 97
3D-footprint Homologues: 6o19_A, 1zme_D, 6gys_C
Binding Motifs: M1710_1.02 aTyCCGAw
			
Related annotations: PaperBLAST

	
			


			

				

				
				
				
				

			

			

		

	
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