Transcription Factor
| Accessions: | 1c9b_R (3D-footprint 20231221) |
| Names: | TATA BOX BINDING PROTEIN, TATA sequence-binding protein, TATA-binding factor, TATA-box factor, TATA-box-binding protein, TBP_HUMAN, Transcription initiation factor TFIID TBP subunit |
| Organisms: | Homo sapiens |
| Libraries: | 3D-footprint 20231221 1 1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed] |
| Uniprot: | P20226 |
| Length: | 180 |
| Pfam Domains: | 6-88 Transcription factor TFIID (or TATA-binding protein, TBP) 94-178 Transcription factor TFIID (or TATA-binding protein, TBP) |
| Sequence: (in bold interface residues) | 1 GSGIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSG 60 61 KMVCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTH 120 121 QQFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGFRK 180 |
| Interface Residues: | 10, 12, 40, 41, 55, 57, 63, 65, 99, 100, 102, 131, 132, 146, 148, 154, 156 |
| 3D-footprint Homologues: | 7z7n_D, 1qna_B, 5n9g_G, 1ytb_A, 5oqj_O, 1ais_A, 4wzs_D, 6cnb_R, 1cdw_A, 5iy6_P |
| Binding Motifs: | 1c9b_QR tATAAaAg |
| Binding Sites: | 1c9b_S 1c9b_T |
| Publications: | Tsai F.T, Sigler P.B. Structural basis of preinitiation complex assembly on human pol II promoters. The EMBO journal 19:25-36 (2000). [Pubmed] |
| Related annotations: | PaperBLAST |
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