Transcription Factor
| Accessions: | T057808_1.02 (CISBP 1.02) |
| Names: | CG7368, T057808_1.02; |
| Organisms: | Drosophila melanogaster |
| Libraries: | CISBP 1.02 1 1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed] |
| Notes: | experiment type:B1H, family:C2H2 ZF |
| Length: | 530 |
| Pfam Domains: | 356-379 C2H2-type zinc finger 356-378 Zinc finger, C2H2 type 370-395 Zinc-finger double domain 384-404 C2H2-type zinc finger 384-406 Zinc finger, C2H2 type 399-422 Zinc-finger double domain 412-434 C2H2-type zinc finger 412-434 Zinc finger, C2H2 type |
| Sequence: (in bold interface residues) | 1 MNFTPFGNTFPGNIPGLPQFTTSTAPLVSTVTAAVTDVTVTGTNNPQQQQQQDAAGSSNR 60 61 YQQQQQQVTHFGQATMTAGQGSSGNKFRGGQDDAIQGDKYNGHLVASSQQQQQQQQQQQT 120 121 QYATVAYASATATSAATDALQAGTSGQQQQQQQMQQQQVTAPQELTQDLCNAILQQQVLQ 180 181 NTSWQTLTPGTTVADYLSHLPANTLPLSLHHFLKYSAETIKKENQQNVVLQVQTGPAIGI 240 241 NTLGTTTISIPQQAEQLTLQPQQQATLQVQTQAAVTATATTATATTAGGSGATSGKKKKR 300 301 KKRSKDRKTKLRPGEIRLGTALDGSPLYMCPECHVAYPEPELLEVHLVGHNLEKRYVCDI 360 361 CQASLKRKDHLTRHKQSHNPERPYICTVCLKAFKRKEQLSLHFVIHSGEKRHQCGECGKG 420 421 FYRKDHLRKHTRSHIARRVKAELNSHVRRENGTSMLQPVVTEATTAALQHANQLASAQQQ 480 481 LQQQQQQQQQQQQQQQQQQQHHIVITQQQATPQQQQQTSQQQQQQQQMIN |
| Interface Residues: | 324, 325, 338, 339, 341, 342, 344, 345, 347, 348, 351, 365, 366, 367, 368, 369, 370, 372, 373, 377, 394, 395, 396, 397, 398, 399, 400, 401, 402, 405, 422, 423, 424, 425, 426, 427, 428, 429, 430, 439, 441, 442, 445, 449 |
| 3D-footprint Homologues: | 1k3x_A, 5kkq_D, 5ei9_F, 6ml4_A, 5k5l_F, 7ysf_A, 6e94_A, 2jpa_A, 7w1m_H, 6jnm_A, 1tf3_A, 8cuc_F, 7y3l_A, 7n5w_A, 5kl3_A, 5k5i_A, 2kmk_A, 5v3j_F, 8ssq_A, 2drp_D, 6blw_A, 6u9q_A, 5yel_A, 4x9j_A, 2gli_A, 1g2f_F, 8h9h_G, 7y3m_I, 2lt7_A, 6a57_A, 1ubd_C, 3uk3_C, 7txc_E, 1llm_D, 1f2i_J, 2wbs_A, 1tf6_A, 8gn3_A, 4m9v_C, 5yj3_D |
| Binding Motifs: | M4876_1.02 KdGGrGkGGGGGGGGWwwvK |
| Related annotations: | PaperBLAST |
Disclaimer and license
These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.