Transcription Factor
| Accessions: | 1mey_C (3D-footprint 20231221) |
| Names: | CONSENSUS ZINC FINGER |
| Libraries: | 3D-footprint 20231221 1 1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed] |
| Length: | 83 |
| Pfam Domains: | 1-14 Zinc-finger double domain 3-26 C2H2-type zinc finger 4-26 C2H2-type zinc finger 4-26 Zinc finger, C2H2 type 18-42 Zinc-finger double domain 31-54 C2H2-type zinc finger 32-54 C2H2-type zinc finger 32-54 Zinc finger, C2H2 type 46-71 Zinc-finger double domain 59-82 C2H2-type zinc finger 60-82 C2H2-type zinc finger 60-82 Zinc finger, C2H2 type |
| Sequence: (in bold interface residues) | 1 EKPYKCPECGKSFSQSSNLQKHQRTHTGEKPYKCPECGKSFSQSSDLQKHQRTHTGEKPY 60 61 KCPECGKSFSRSDHLSRHQRTHQ |
| Interface Residues: | 1, 4, 14, 15, 16, 17, 18, 20, 21, 25, 42, 43, 44, 45, 46, 47, 48, 49, 50, 53, 70, 71, 72, 73, 74, 75, 76, 77, 78 |
| 3D-footprint Homologues: | 1yuj_A, 2kmk_A, 6ml4_A, 7n5w_A, 1tf3_A, 3uk3_C, 6jnm_A, 8cuc_F, 7y3l_A, 4x9j_A, 2i13_A, 1mey_C, 6blw_A, 5kkq_D, 6u9q_A, 5yel_A, 5ei9_F, 2jpa_A, 5kl3_A, 7ysf_A, 1g2f_F, 6wmi_A, 5k5i_A, 8ssq_A, 7w1m_H, 5und_A, 2gli_A, 7eyi_G, 5k5l_F, 8ssu_A, 1ubd_C, 5v3j_F, 8h9h_G, 7y3m_I, 6e94_A, 1tf6_A, 2lt7_A, 6a57_A, 8gn3_A, 2wbs_A, 1f2i_J, 7txc_E, 2drp_D, 1llm_D, 4m9v_C, 5yj3_D |
| Binding Motifs: | 1mey_C GrGGCAGAAy 1mey_CF GGGGCAGAACnnTGAGGCAGAAC |
| Binding Sites: | 1mey_A 1mey_B |
| Publications: | Kim C.A, Berg J.M. A 2.2 A resolution crystal structure of a designed zinc finger protein bound to DNA. Nature structural biology 3:940-5 (1996). [Pubmed] |
| Related annotations: | PaperBLAST |
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