Transcription Factor
| Accessions: | 4omy_A (3D-footprint 20231221), 4omy_B (3D-footprint 20231221), 4omy_C (3D-footprint 20231221), 4omy_D (3D-footprint 20231221), 4on0_A (3D-footprint 20231221), 4on0_B (3D-footprint 20231221), 4on0_C (3D-footprint 20231221), 4on0_D (3D-footprint 20231221) |
| Names: | NolR, Q83TD2_RHIFR |
| Organisms: | Sinorhizobium fredii |
| Libraries: | 3D-footprint 20231221 1 1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed] |
| Uniprot: | Q83TD2 |
| Length: | 97 |
| Pfam Domains: | 18-72 Helix-turn-helix domain 23-69 Bacterial regulatory protein, arsR family 24-72 MarR family 24-67 Winged helix-turn-helix DNA-binding |
| Sequence: (in bold interface residues) | 1 QPLSPEKHEEAEIAAGFLSAMANPKRLLILDSLVKEEMAVGALANKVGLSQSALSQHLSK 60 61 LRAQNLVSTRRDAQTIYYSSSSDSVMKILGALSEIYG |
| Interface Residues: | 50, 51, 52, 53, 55, 56, 64, 71, 73, 74 |
| 3D-footprint Homologues: | 4on0_B, 1ic8_B, 2h8r_B, 4hf1_A |
| Binding Motifs: | 4omy_A CTAA 4omy_AB TnTCAGnnnnnnCTAa 4omy_CD AannTCAGnnnnnnCTmA 4on0_AB TAnCATCAGnnnnnnCTAA 4on0_B CTGATGntA 4on0_CD TTAGnnnnnnCTkaTG |
| Binding Sites: | 4omy_E / 4omy_G 4omy_F / 4omy_H 4on0_E / 4on0_G 4on0_F / 4on0_H |
| Publications: | Lee S.G, Krishnan H.B, Jez J.M. Structural basis for regulation of rhizobial nodulation and symbiosis gene expression by the regulatory protein NolR. Proceedings of the National Academy of Sciences of the United States of America 111:6509-14 (2014). [Pubmed] |
| Related annotations: | PaperBLAST |
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