Transcription Factor

Accessions: Q9CA27 (JASPAR 2024)
Names: EF118_ARATH
Organisms: Arabidopsis thaliana
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Uniprot: Q9CA27
Length:
Binding Motifs: MA1671.1 cdcCGCCGCcr
MA1671.2 cCGCCGCc
Binding Sites: MA1671.2.17 / MA1671.2.3
MA1671.1.1
MA1671.1.10
MA1671.1.11 / MA1671.1.5
MA1671.1.12 / MA1671.1.6
MA1671.1.13 / MA1671.1.7
MA1671.1.14 / MA1671.1.8
MA1671.1.15 / MA1671.1.9
MA1671.1.16
MA1671.1.10 / MA1671.1.17
MA1671.1.11 / MA1671.1.18
MA1671.1.12 / MA1671.1.16 / MA1671.1.19
MA1671.1.1 / MA1671.1.2
MA1671.1.13 / MA1671.1.20
MA1671.1.2 / MA1671.1.3
MA1671.1.4
MA1671.1.3 / MA1671.1.5
MA1671.1.6
MA1671.1.7
MA1671.1.8
MA1671.1.4 / MA1671.1.9
MA1671.1.14
MA1671.1.15
MA1671.1.17
MA1671.1.18
MA1671.1.19
MA1671.1.20
MA1671.2.1 / MA1671.2.10 / MA1671.2.14 / MA1671.2.2 / MA1671.2.20
MA1671.2.11 / MA1671.2.12 / MA1671.2.15 / MA1671.2.16 / MA1671.2.4 / MA1671.2.6
MA1671.2.13
MA1671.2.18
MA1671.2.19
MA1671.2.5
MA1671.2.7
MA1671.2.8
MA1671.2.9
Publications: Sullivan AM, Arsovski AA, Lempe J, Bubb KL, Weirauch MT, Sabo PJ, Sandstrom R, Thurman RE, Neph S, Reynolds AP, Stergachis AB, Vernot B, Johnson AK, Haugen E, Sullivan ST, Thompson A, Neri FV 3rd, Weaver M, Diegel M, Mnaimneh S, Yang A, Hughes TR, Nemhauser JL, Queitsch C, Stamatoyannopoulos JA. Mapping and dynamics of regulatory DNA and transcription factor networks in A. thaliana 8:2015-2030 (Cell). [Pubmed]
Related annotations: PaperBLAST

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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.