Transcription Factor

						

			
Accessions: 5xxp_A (3D-footprint 20231221), 5xxp_B (3D-footprint 20231221)

			
Names: LysR-type regulatory protein, Q9WXC7_CUPNE
Organisms: Cupriavidus necator, Cupriavidus necator (Alcaligenes eutrophus)
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Length: 87
Pfam Domains:      3-62 Bacterial regulatory helix-turn-helix protein, lysR family
Sequence: 
(in bold interface residues)		   1 MEFRQLKYFIAVAEAGNMAAAAKRLHVSQPPITRQMQALEADLGVVLLERSHRGIELTAA   60
  61 GHAFLEDARRILELAGRSGDRSRAAAR
Interface Residues: 28, 29, 30, 31, 33, 34, 52, 53
3D-footprint Homologues: 4iht_D, 5xxp_A, 7d98_Q
Binding Motifs: 5xxp_A CGTAAnnnTG
5xxp_AB TtACgnnnnncGTAAnnnT
Binding Sites: 5xxp_E
5xxp_F
			
Publications: Koentjoro MP, Adachi N, Senda M, Ogawa N, Senda T. Crystal structure of the DNA-binding domain of the LysR-type transcriptional regulator CbnR in complex with a DNA fragment of the recognition-binding site in the promoter region. FEBS J 285:977-989 (2018). [Pubmed]
Related annotations: PaperBLAST

	
			


			

				

				
				
				
				

			

			

		

	
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