Transcription Factor

						

			
Accessions: Q9CAA9 (JASPAR 2024)

			
Names: AtbHLH49, Basic helix-loop-helix protein 49, BH049_ARATH, bHLH 49, bHLH transcription factor bHLH049, Protein ACTIVATOR FOR CELL ELONGATION 1, Transcription factor bHLH49, Transcription factor EN 82
Organisms: Arabidopsis thaliana
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Length: 486
Pfam Domains:   312-360 Helix-loop-helix DNA-binding domain
Sequence: 
(in bold interface residues)		   1 MDLSAKDEFSAEKRNPDNYDSVNNPSGDWRVDSYPSENLISAGPASCSPSQMMDSFGQTL   60
  61 WYDPTSVQAVGYAGFNGGNASSSSFRGSIDRSLEMGWNLPNLLPPKGNGLFLPNASSFLP  120
 121 PSMAQFPADSGFIERAARFSLFSGGNFSDMVNQPLGNSEAIGLFLQGGGTMQGQCQSNEL  180
 181 NVGEPHNDVSVAVKESTVRSSEQAKPNVPGSGNVSEDTQSSGGNGQKGRETSSNTKKRKR  240
 241 NGQKNSEAAQSHRSQQSEEEPDNNGDEKRNDEQSPNSPGKKSNSGKQQGKQSSDPPKDGY  300
 301 IHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQ  360
 361 RQVEFLSMKLATVNPQMDFNLEGLLAKDALQLRAGSSSTTPFPPNMSMAYPPLPHGFMQQ  420
 421 TLSSIGRTITSPLSPMNGGFKRQETNGWEGDLQNVIHINYGAGDVTPDPQAAATASLPAA  480
 481 NMKVEP
Interface Residues: 314, 315, 317, 318, 321, 322, 345, 430, 431, 432, 434, 435
3D-footprint Homologues: 7d8t_A, 4zpk_A, 5nj8_D, 7ssa_L, 5eyo_A, 5v0l_A, 1am9_A, 7xi3_A, 5gnj_I, 6g1l_A, 4h10_A, 8ia3_B, 8osl_P, 5hlg_E
Binding Motifs: MA1740.1 arCACGTGCc
MA1740.2 CACGTGC
			
Publications: Toledo-Ortiz G., Huq E., Quail P. H. The Arabidopsis basic/helix-loop-helix transcription factor family.. Plant Cell 15:1749-1770 (2003). [Pubmed]
Related annotations: PaperBLAST

	
			


			

				

				
				
				
				

			

			

		

	
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