Transcription Factor

Accessions: FRUITFULL (EEADannot 2023-12-22)
Names: FUL;Q38876
Organisms: Arabidopsis thaliana
Libraries: EEADannot 2023-12-22 1
1 Contreras-Moreira B, Sebastian A. FootprintDB: Analysis of Plant Cis-Regulatory Elements, Transcription Factors, and Binding Interfaces. Methods Mol Biol 1482:259-77 (2016) [Pubmed]
Notes: family:MADS-box
Length: 242
Pfam Domains: 9-59 SRF-type transcription factor (DNA-binding and dimerisation domain)
78-174 K-box region
Sequence:
(in bold interface residues)
1 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSSKGKLFEYSTD 60
61 SCMERILERYDRYLYSDKQLVGRDVSQSENWVLEHAKLKARVEVLEKNKRNFMGEDLDSL 120
121 SLKELQSLEHQLDAAIKSIRSRKNQAMFESISALQKKDKALQDHNNSLLKKIKEREKKTG 180
181 QQEGQLVQCSNSSSVLLPQYCVTSSRDGFVERVGGENGGASSLTEPNSLLPAWMLRPTTT 240
241 NE
Interface Residues: 3, 4, 5, 15, 18, 19, 23, 216
3D-footprint Homologues: 7x1n_C, 1n6j_A, 1c7u_A, 1mnm_A, 1hbx_A, 2jlg_B
Binding Motifs: EEAD0140 / EEAD0141 TTwCCmaAAAwrGmA
EEAD0142 wacwTaCYATAAATr
EEAD0143 cCYATTTATrG
Related annotations: PaperBLAST

Disclaimer and license

These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.