Transcription Factor
| Accessions: | T001928_1.02 (CISBP 1.02) |
| Names: | PF13_0097, T001928_1.02; |
| Organisms: | Plasmodium falciparum |
| Libraries: | CISBP 1.02 1 1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed] |
| Notes: | experiment type:PBM, family:AP2 |
| Length: | 2672 |
| Pfam Domains: | 1052-1101 AP2 domain |
| Sequence: (in bold interface residues) | 1 MKERKKVSKVKESKKSLVENDNFCLNNYRNNFYMENDNKKNMKEEKEERKEIFTSRNNDS 60 61 LVDVDYNKMMNDINKYENTILNSNNSRCNNFPNYDQIIYNNNVLSNGPVNNSVNSNNTNN 120 121 NMMNNNMMNSNMMNNNRMNNNIMNSNMMNDNMMNDNMMNDNMMNDNMMNDNMMNDNMMND 180 181 NMMNDNMMNDNMMSNNIMNNNIMNNNIMNNNIMNNNIMNNNIINKSNFSEVTNYSTSNKE 240 241 PFIQTQNMYLKDANNNLNSCYVNTSMCDSICSNMSNNVSNNMVDKITVDHSCMSNNSNDH 300 301 NNNSNCNYYYNNNNDYNNDYNNDYNNDYNNDYNNDYNNDYNNNYYNNTKGQEGQKQGKIG 360 361 NGKLVNMDNMFNINEHNNIYRERIDSLNTVNNTSNYKYNNYVNIINNDENNNNNNNNNNA 420 421 NYKNMENPPFKTVTNMKYAENLLKDSNDIHVVKNDVSLFNHTCDIVSNPYNNNNNNNCGS 480 481 SNNIIHSNPLVENTSSFCSENHTSIYPPKNKKNNYNNNNNNNNDNKQLCNFNNTSYNFPE 540 541 QTHINCDLSNNNNYAVLTNKYNSNLNNESYNVSTCNNNNDFNHANNNNNNYNIQNINIKD 600 601 INVNIKLENYFNEVLNNNNNTKEYINNTYMNKHIDIDTQHMNVHLNNSIKSINMDNNLEH 660 661 INFPMMETQPNTPHIFNNILNNNHSNNFESDSVISNIKEITRNNITDDSSVIRNLLNNNQ 720 721 MDHKLVNNNNNNNYINNDIKKMDGGGNVNLQNMPKTMSIVTNAVTNSVTSSLGNVLENIK 780 781 RPSQYMNNMSYLGNVNKYINKNDEHLSFNKEDNIIGNNNNNNNAENTKNHNINSNDNNND 840 841 NNNDNNNDNNNDDSGNNNYNNHHLNKHDKINNNFNSNWIRKLKSFGASSDNEDENEELPI 900 901 NANHNFYINNFLLNQHFNFNKNDNIRDINSKMSGGNSISEDNDMNHNNINSNNNNINSHN 960 961 NNMNNNNDNMNNMNNNNNNINNMNNNNNNINNMNNNNNNINNMNNNNNNMNNMNNNNNNI 1020 1021 NNNNNNNNHNNNSSNGKNMDTAMNSLNMLILPKIKGVRFDKSGRRWVASWSQNGNQKRQY 1080 1081 FPVKKFGQAQAKYLAIYARIQAVNCLQRKPHKPRMSKRLSEKKKLLLNMEGKEKNELGNN 1140 1141 ECNNNNNNYISKNGDEDDDNIEDSYNDDEICEDEENYVDIDHNDDEHYDIDDNDDNGDNG 1200 1201 DNSHNDDNDDEHYDITNNDNDNNNNDNNNDNNNDNNNDNNNNNNNNNNNNDNNNNDIKIM 1260 1261 DQQSGDKEYVGILNNESKNVGKNIGQNIGQNIGQNVGKNVGKNIGKNVEKNIGPDIKDEY 1320 1321 MKSITNNDTQTKDQDIANETTKIIYPNNITDNNHIVNDNVCLIMASNNLENIPEDKKHEQ 1380 1381 NVTIHSIDEQKDQSNKFLRERKNKRMHNNYDNFYDNSFKKKLSDYNEEINKSSDEEKEVS 1440 1441 QTNSLKYKCEEENDQNYDKQERKILQNDTNECEIICINLESTKQIDNLKDLSLHKEENNN 1500 1501 NDDIYNIDNIDNVLLDEILRVQNACRKGKKKEIKLILLNAENKMTLCFDEKDKINYMNDI 1560 1561 DTIKNLDVNKKNLLLNKLKDYYNNNNNNIFLIEQHNECTISQINYEDIESIKDDVLIEYY 1620 1621 DCQENYNKNRNGKNTDHAKNVIDQKKKGENVFIVEEIKNCKNQISCDNLNKDKLNDTMIH 1680 1681 DELYHSIEFDIDKDDKKEETEYKENNKLLEKEYYSIMKSTEDNVEQVSTTQNIEITYSCG 1740 1741 TNNSLNINNLKNNKNDDIKKNITNNNNNNNNKINNNNNNSDGDGDKGSYNSYNAKQKNRR 1800 1801 RYEYMKKLDMRKRQNNLDIMRHVQNYHINNSKVIKKKKVLKNTLSLIKNTVSNNDDDDTY 1860 1861 NNLCPLDVSNNDMVDSEFSLNTNFSDKNKKANPFKGTKNKLSLFYNKNSINNIKNSMLLL 1920 1921 NDIKRIVDSGANDSILNDNSNLSNKEDTNKVSKNSTSFLKQENIKKEKNYELKGNSTINN 1980 1981 NNNNNNNNNNNNNNNNNSSSSNNNDNNLKGLFTGEKKTCMKSYLVNCNKIEKFIQNNMIE 2040 2041 GYLNKKSSIFNMNNEEENKLGNNFMKYNSSKHDEKNNVDLLNGENNNIKLYGLDSFHKPD 2100 2101 LIKNKNVTKNKMKTIFSKKICSNENGKDHKGVVEDEYKVESVQQNEMLDGDQNYFTIFDD 2160 2161 KNGEQNSSAIFYNNNNNHGNLHFPLTNQNEINLCEEKRSNFVNPYIKNIINKDYKQNFIN 2220 2221 DNSNNCNILNHNINPINEENINYNNSIEYDKNDGNILNNNTKSTSAYIYSTNRNNYNSTY 2280 2281 HMDNIAYDNHKSTLDNKNCDKNIIIVDHNMNNSNNSYVLNNVRKDITIINNERASHGSKF 2340 2341 VLQHNMDNMENIDNMENIDNMENIDNMENIDNMENIDNMENIDNIDNIDNIDNTDNINNN 2400 2401 IIGMVSNTSMDILSNNGEYISSPITNNLSYNHMVNGNVVSEFIKNDDMINMDGVNDMNNM 2460 2461 DNMNNMNNMDNMNNMNNMNHMNNMDNINNMNNMNNMNNMNNMNNMNNMNNMNNMNNMNNM 2520 2521 NNMNNMNHVNSISDENVKLLNIENIQTELTSSNNNKLNNIYSNGYINNCINRYANNYSNE 2580 2581 SSNNFTNNYKNNFNNVYQNPFTHNHPSDYNNEIIHMNLVQNNVVADKIRNMDNYSTYNDC 2640 2641 YNNKEENQQRNNLRQNYNTNKVSNSIYKPIYM |
| Interface Residues: | 2575, 2576, 2579, 2619, 2620 |
| 3D-footprint Homologues: | 3mva_O |
| Binding Motifs: | M0055_1.02 wGCTCAra |
| Related annotations: | PaperBLAST |
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