Transcription Factor

						

			
Accessions: 5eg6_C (3D-footprint 20231221)

			
Names: J kappa-recombination signal-binding protein, RBP-J kappa, Recombining binding protein suppressor of hairless, SUH_MOUSE
Organisms: Mus musculus
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Uniprot: P31266
Length: 413
Pfam Domains:    21-148 LAG1, DNA binding
  149-295 Beta-trefoil DNA-binding domain
  334-410 IPT/TIG domain
Sequence: 
(in bold interface residues)		   1 PPKRLTREAMRNYLKERGDQTVLILHAKVAQKSYGNEKRFFCPPPCVYLMGSGWKKKKEQ   60
  61 MERDGCSEQESQPCAFIGIGNSEMQQLNLEGKNYCTAKTLYISDSDKRKHFMLSVKMFYG  120
 121 NSDDIGVFLSKRIKVISKPSKQSLKNADLCIASGTKVALFNRLTVSTRYLHVEGGNFHAS  180
 181 SQQWGAFYIHLLDDDESEGEEFTVRDGYIHYGQTVKLVCSVTGMALPRLIIRKVDKQTAL  240
 241 LDADDPVSQLHKCAFYLKDTERMYLCLSQERIIQFQATPCPKEQNKEMINDGASWTIIST  300
 301 DKAEYTFYEGMGPVLAPVTPVPVVESLQLNGGDVAMLELTGQNFTPNLRVWFGDVEAETM  360
 361 YRCGESMLCVVPDISAFREGWRWVRQPVQVPVTLVRNDGVIYSTSLTFTYTPE
Interface Residues: 34, 37, 39, 137, 138, 141
3D-footprint Homologues: 3brd_A, 3iag_C, 5e24_E
Binding Motifs: 5eg6_C TGGGAA
Binding Sites: 5eg6_A
5eg6_B
			
Related annotations: PaperBLAST

	
			


			

				

				
				
				
				

			

			

		

	
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