Transcription Factor

Accessions: 6r2v_A (3D-footprint 20231221)
Names: AtNF-YA-6, NFYA6_ARATH, Nuclear transcription factor Y subunit A-6
Organisms: Arabidopsis thaliana
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Uniprot: Q9LVJ7
Length: 62
Pfam Domains: 1-55 CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B
Sequence:
(in bold interface residues)
1 PIFVNAKQYQAILRRRERRAKLEAQNKLIKVRKPYLHESRHLHALKRVRGSGGRFLNTKK 60
61 HQ
Interface Residues: 40, 43, 47, 49, 54, 55
3D-footprint Homologues: 4awl_A, 4g92_A, 6r2v_A
Binding Motifs: 6r2v_A CCAATcc
Binding Sites: 6r2v_I
6r2v_J
Publications: Chaves-Sanjuan A, Gnesutta N, Gobbini A, Martignago D, Bernardini A, Fornara F, Mantovani R, Nardini M. Structural determinants for NF-Y subunit organization and NF-Y/DNA association in plants. Plant J : (2020). [Pubmed]
Related annotations: PaperBLAST

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