Transcription Factor
Accessions: | 6r2v_A (3D-footprint 20231221) |
Names: | AtNF-YA-6, NFYA6_ARATH, Nuclear transcription factor Y subunit A-6 |
Organisms: | Arabidopsis thaliana |
Libraries: | 3D-footprint 20231221 1 1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed] |
Uniprot: | Q9LVJ7 |
Length: | 62 |
Pfam Domains: | 1-55 CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B |
Sequence: (in bold interface residues) | 1 PIFVNAKQYQAILRRRERRAKLEAQNKLIKVRKPYLHESRHLHALKRVRGSGGRFLNTKK 60 61 HQ |
Interface Residues: | 40, 43, 47, 49, 54, 55 |
3D-footprint Homologues: | 4awl_A, 4g92_A, 6r2v_A |
Binding Motifs: | 6r2v_A CCAATcc |
Binding Sites: | 6r2v_I 6r2v_J |
Publications: | Chaves-Sanjuan A, Gnesutta N, Gobbini A, Martignago D, Bernardini A, Fornara F, Mantovani R, Nardini M. Structural determinants for NF-Y subunit organization and NF-Y/DNA association in plants. Plant J : (2020). [Pubmed] |
Related annotations: | PaperBLAST |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.