Transcription Factor
Accessions: | 6ml5_A (3D-footprint 20231221) |
Names: | Bone morphogenetic protein-induced factor 1, Brain-specific protein 1, ZBT24_MOUSE, Zinc finger and BTB domain-containing protein 24, Zinc finger protein 450 |
Organisms: | Mus musculus |
Libraries: | 3D-footprint 20231221 1 1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed] |
Uniprot: | Q80X44 |
Length: | 142 |
Pfam Domains: | 5-27 C2H2-type zinc finger 5-15 C2H2-type zinc finger 5-27 Zinc finger, C2H2 type 34-55 C2H2-type zinc finger 34-54 Zinc-finger of C2H2 type 34-55 C2H2-type zinc finger 48-71 Zinc-finger double domain 60-84 C2H2-type zinc finger 61-83 Zinc finger, C2H2 type 61-83 C2H2-type zinc finger 61-83 Zinc-finger of C2H2 type 75-99 Zinc-finger double domain 89-100 C2H2-type zinc finger 89-111 Zinc finger, C2H2 type 89-111 C2H2-type zinc finger 105-127 Zinc-finger double domain 117-137 C2H2-type zinc finger 117-139 Zinc finger, C2H2 type 117-139 C2H2-type zinc finger |
Sequence: (in bold interface residues) | 1 GSKSFTCDQCGKYFSQKRQLKSHYRVHTGHSLPECSHCHRKFMDVSQLKKHLRTHTGEKP 60 61 FTCEICGKSFTAKSSLQTHIRIHRGEKPYSCSICGKCFSDSSAKRRHCILHTGKKPFSCP 120 121 ECGLQFARLDNLKAHLKIHSKE |
Interface Residues: | 15, 16, 17, 18, 19, 22, 26, 43, 44, 45, 46, 47, 49, 50, 52, 53, 56, 61, 71, 72, 73, 74, 75, 77, 78, 79, 82, 99, 100, 101, 102, 103, 104, 105, 106, 107, 127, 128, 129, 130, 131, 133, 134, 137 |
3D-footprint Homologues: | 5v3j_F, 8ssu_A, 5kkq_D, 1tf6_A, 5yel_A, 6wmi_A, 5ei9_F, 8ssq_A, 7w1m_H, 2i13_A, 7y3l_A, 7n5w_A, 3uk3_C, 8cuc_F, 6ml4_A, 2gli_A, 8gn3_A, 4x9j_A, 5kl3_A, 5und_A, 1f2i_J, 8h9h_G, 7eyi_G, 7y3m_I, 6e94_A, 7ysf_A, 2jpa_A, 1ubd_C, 2kmk_A, 1tf3_A, 6jnm_A, 1g2f_F, 6blw_A, 6u9q_A, 1llm_D, 1mey_C, 5k5i_A, 4m9v_C, 2lt7_A, 6a57_A, 7txc_E, 2wbs_A, 2drp_D, 5yj3_D |
Binding Motifs: | 6ml5_A cAGGTCCTGgACG |
Binding Sites: | 6ml5_E 6ml5_F |
Publications: | Ren R, Hardikar S, Horton JR, Lu Y, Zeng Y, Singh AK, Lin K, Coletta LD, Shen J, Lin Kong CS, Hashimoto H, Zhang X, Chen T, Cheng X. Structural basis of specific DNA binding by the transcription factor ZBTB24. Nucleic Acids Res 47:8388-8398 (2019). [Pubmed] |
Related annotations: | PaperBLAST |
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