Transcription Factor
| Accessions: | T074197_1.02 (CISBP 1.02) |
| Names: | fgeneshCV_pg.C_scaffold_18000164, T074197_1.02; |
| Organisms: | Chlorella vulgaris |
| Libraries: | CISBP 1.02 1 1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed] |
| Notes: | experiment type:PBM, family:CxC |
| Length: | 946 |
| Pfam Domains: | 176-213 Tesmin/TSO1-like CXC domain 255-294 Tesmin/TSO1-like CXC domain |
| Sequence: (in bold interface residues) | 1 MLPQRMGMPQQQQGAPFLQGQQGPSQYQQQPRPQMQHPGAHHMPGQGPRPAQQQLQAGHT 60 61 YFMRPSQVQGPHLQQQQQGARPLHMQQHPHQTQAHPQQQQQAPSQPQPQPQPQQLQQQHL 120 121 QGMPPIGGPGSNGVPASSAPPTSSGQLQSLQSPVRQHAPRPSPKVGRAAVAALPAKKHCN 180 181 CKNSRCLKLYCECFASGRYCDGCNCVNCCNNKESEQVRQAAVEAILERNPNAFRPKIQGG 240 241 TEEGTHVAIQGAAARHNKGCNCKKSGCLKKYCECFQASIFCSDNCKCIDCKNFEGSDARE 300 301 MVMMSLVHEHNRVGQAGMVKRARMHSQPTSTPLQPVFTGGMSMTATLGSPNLGASTGMQP 360 361 VDSRLPGQPGTSSGQPGVSSQLMPAPSPHQGAHPSKSYQRVYSSGGPPGGAAVQSREMHR 420 421 PDGASTPTMHRSPALPPTRAPSAGDRPAGQPARSPGQPLVKPKSVLQETMREMVKRGGVE 480 481 EMCSLLLLVAQEEQQKLQQASAKTTPPSEQPSEAGTGAAGSKSLDADGDTNMDGPGTTVG 540 541 VTQEGAAVRTPEQSGAPPTAAAANVPSGVYEAQERAVLQEYHFILKKILDRVQKKTAADF 600 601 DATAAARATASAALAAVPGNLLGSITGSPQLTSPMSSPRPAYFINNSPGMSRSGASPVMP 660 661 GQGLGGNVRVLTLGSPGGLQASQPSAQRMVNLSTLGRPAGLGQQQQTAPMRQQGHGEGPT 720 721 LTPPRATPDAADYAGRQGPFPGPAGSYRPAMQHQQGAPRPAGAVRPPPLRRGGPPQPSVS 780 781 IVLSPRPPAPAKMAAPQSQPMPGMISAPTITSSAAYQGHPRPQQPPVGTMPLGLPVLLQR 840 841 GGPWTAPGGPVQPPRPAGGARPFAGAGLAPAGPPGIQPELRPSQQQAQHAGSFPQQPSLP 900 901 GSSDQLRTGAHDKALSATPTTAQLLQQQQQQQQAAGVPNGAVKDEQ |
| Interface Residues: | 185, 190, 271 |
| 3D-footprint Homologues: | 4rkh_F, 5fd3_A |
| Binding Motifs: | M0599_1.02 dTTTraawtw |
| Related annotations: | PaperBLAST |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.