Transcription Factor

Accessions: AtMYB24 (AthaMYB 1.0)
Names: AtMYB24, Myb-related protein 24, Transcription factor MYB24
Organisms: Arabidopsis thaliana
Libraries: AthaMYB 1.0 1
1 Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). [Pubmed]
Uniprot: Q9SPG9
Length: 215
Pfam Domains: 19-66 Myb-like DNA-binding domain
22-79 Myb-like DNA-binding domain
72-115 Myb-like DNA-binding domain
76-117 Myb-like DNA-binding domain
Sequence:
(in bold interface residues)
1 MEKRESSGGSGSGDAEVRKGPWTMEEDLILINYIANHGEGVWNSLAKSAGLKRTGKSCRL 60
61 RWLNYLRPDVRRGNITPEEQLTIMELHAKWGNRWSKIAKHLPGRTDNEIKNFWRTKIQKY 120
121 IIKSGETTTVGSQSSEFINHHATTSHVMNDTQETMDMYSPTTSYQHASNINQQLNYGNYV 180
181 PESGSIMMPLSVDQSEQNYWSVDDLWPMNIYNGN*
Interface Residues: 11, 19, 54, 55, 56, 57, 59, 60, 63, 64, 65, 106, 107, 110, 111, 114, 115, 116
3D-footprint Homologues: 7xur_A, 1vfc_A, 3osg_A, 2kdz_A, 5eyb_B, 6kks_A, 1mse_C, 3zqc_A
Binding Motifs: AtMYB24_I dhmWGTTR
AtMYB24_II GGTAGGTG
Binding Sites: AAAAGTTA
ACAAGTTA
GGTAGGTG
GTCAGTTA
TACTGTTG
Publications: Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). [Pubmed]
Related annotations: PaperBLAST

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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.