Transcription Factor
| Accessions: | T008813_1.02 (CISBP 1.02) |
| Names: | estExt_fgeneshNG_pg.C_820014, T008813_1.02; |
| Organisms: | Naegleria gruberi |
| Libraries: | CISBP 1.02 1 1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed] |
| Notes: | experiment type:PBM, family:AT hook |
| Length: | 254 |
| Pfam Domains: | 42-53 AT hook motif |
| Sequence: (in bold interface residues) | 1 MPGCYTKFSVVEFATPSKQHNTCVGQYNNPLSSSLSSNPEMPRKRGRPAKNPNSSSVKMM 60 61 ITKTEMFNASSHSSYSQAKTQCYPYESEIRLSSGITKQKNKKATSNNSLLSCSYLPSVVS 120 121 ATLSSKVSSTTHIIPAVPVLLNNSNIVAPSHCNSPSLSCSSSSSLNSLFNAENISPSHHS 180 181 KYSTPKYVNKRQSSHSPISSTSSNCVSNTTQDFIETLSIPTTSTLVMHSNTLSTNSPTTR 240 241 RIIRTSISIKELLN |
| Interface Residues: | 70, 71, 72, 73 |
| 3D-footprint Homologues: | 1dfm_A |
| Binding Motifs: | M0144_1.02 mdrawaRt |
| Related annotations: | PaperBLAST |
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