Transcription Factor
| Accessions: | UP00440A (UniPROBE 20160601) |
| Names: | None, PFE0840c, putative, transcription factor with AP2 domain(s) |
| Organisms: | Plasmodium falciparum |
| Libraries: | UniPROBE 20160601 1 1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed] |
| Description: | transcription factor with AP2 domain(s), putative: putative Plasmodium falciparum transcription factor, AP2 domain |
| Length: | 60 |
| Pfam Domains: | 2-53 AP2 domain |
| Sequence: (in bold interface residues) | 1 NSRIVGVHYDRKQFRWKATWYTSHGRRCAKYYPVKQYGYLEAKKMAIECRKAYNLYKKLK 60 |
| Interface Residues: | 11, 13, 16, 17 |
| 3D-footprint Homologues: | 6wmp_C, 7mid_D |
| Binding Motifs: | UP00440A_1 ChwysmdTGACATCAwrmrwag |
| Binding Sites: | TGACATCA ACAAATAA CATCTGTA CGTCATCA TGTCAACA TTTCGAAA AAACAAAT AAATAAAG AGATGATG ATGAAGTA ATGATGAA ATGATGTC CATCATAA CATCATAC CATCTTCG CGACATCG GATGACGA GATGCAGC GATGTCAC TATGATGA |
| Publications: | Campbell TL, De Silva EK, Olszewski KL, Elemento O, Llinás M. Identification and genome-wide prediction of DNA binding specificities for the ApiAP2 family of regulators from the malaria parasite. PLoS Pathog : (2010). [Pubmed] |
| Related annotations: | PaperBLAST |
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