Transcription Factor
| Accessions: | T109447_1.02 (CISBP 1.02) |
| Names: | GT-1, T109447_1.02; |
| Organisms: | Arabidopsis thaliana |
| Libraries: | CISBP 1.02 1 1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed] |
| Notes: | experiment type:PBM, family:MADF |
| Length: | 278 |
| Pfam Domains: | 83-150 Myb/SANT-like DNA-binding domain 86-169 Myb/SANT-like DNA-binding domain |
| Sequence: (in bold interface residues) | 1 MFISDKSRPTDFYKDDHHNSSTTSTTRDMMIDVLTTTNESVDLQSHHHHNHHNHHLHQSQ 60 61 PQQQILLGESSGEDHEVKAPKKRAETWVQDETRSLIMFRRGMDGLFNTSKSNKHLWEQIS 120 121 SKMREKGFDRSPTMCTDKWRNLLKEFKKAKHHDRGNGSAKMSYYKEIEDILRERSKKVTP 180 181 PQYNKSPNTPPTSAKVDSFMQFTDKGFDDTSISFGSVEANGRPALNLERRLDHDGHPLAI 240 241 TTAVDAVAANGVTPWNWRETPGNGKSSEKAYINLSLKV |
| Interface Residues: | 113, 133, 136, 137, 138, 140, 141 |
| 3D-footprint Homologues: | 2h8r_B, 5eyb_B, 3hqg_A |
| Binding Motifs: | M1276_1.02 gTTAACCa |
| Related annotations: | PaperBLAST |
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