Transcription Factor
| Accessions: | T05695 (AthalianaCistrome v4_May2016), Q9LNE0 (JASPAR 2024) |
| Names: | AT1G06070, bZIP69, T05695;, AtbZIP transcription factor, Basic-leucine zipper (BZIP, BZip transcription factor AtbZip69, Q9LNE0_ARATH, T21E18.12 protein |
| Organisms: | Arabidopsis thaliana |
| Libraries: | AthalianaCistrome v4_May2016 1, JASPAR 2024 2 1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed] 2 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Notes: | ecotype:Col-0, experiment type: ampDAP-seq, experiment type: ampDAP-seq (methyl-cytosines removed by PCR), experiment type: DAP-seq, family:bZIP |
| Length: | 423 |
| Pfam Domains: | 210-261 Basic region leucine zipper 212-268 bZIP transcription factor |
| Sequence: (in bold interface residues) | 1 MDKEKSPAPPPSGGLPPPSGRYSAFSPNGSSFAMKAESSFPPLTPSGSNSSDANRFSHDI 60 61 SRMPDNPPKNLGHRRAHSEILTLPDDLSFDSDLGVVGAADGPSFSDDTDEDLLYMYLDME 120 121 KFNSSATSTSQMGEPSEPTWRNELASTSNLQSTPGSSSERPRIRHQHSQSMDGSTTIKPE 180 181 MLMSGNEDVSGVDSKKAISAAKLSELALIDPKRAKRIWANRQSAARSKERKMRYIAELER 240 241 KVQTLQTEATSLSAQLTLLQRDTNGLGVENNELKLRVQTMEQQVHLQDALNDALKEEVQH 300 301 LKVLTGQGPSNGTSMNYGSFGSNQQFYPNNQSMHTILAAQQLQQLQIQSQKQQQQQQQHQ 360 361 QQQQQQQQQFHFQQQQLYQLQQQQRLQQQEQQSGASELRRPMPSPGQKESVTSPDRETPL 420 421 TKD |
| Interface Residues: | 216, 220, 223, 224, 227, 228 |
| 3D-footprint Homologues: | 7x5e_F |
| Binding Motifs: | M0229 kmCAGCTGkCA M0231 kmCAGCTGkCA MA1746.1 TGmCAGCTGkm |
| Publications: | Lacroix B, Citovsky V. Characterization of VIP1 activity as a transcriptional regulator in vitro and in planta. Sci Rep : (2013;3:2440.). [Pubmed] |
| Related annotations: | PaperBLAST |
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