Transcription Factor

						

			
Accessions: ZNF784_full (HumanTF 1.0)

			
Names: ZN784_HUMAN, ZNF784
Organisms: Homo sapiens
Libraries: HumanTF 1.0 1
1 Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]
Uniprot: Q8NCA9
Notes: Ensembl ID: ENSG00000179922; Full protein sequence; TF family: znfC2H2; Clone source: hORFeome
Length: 324
Pfam Domains:   115-139 Zinc-finger double domain
  129-151 Zinc finger, C2H2 type
  196-218 Zinc finger, C2H2 type
  196-218 C2H2-type zinc finger
  211-235 Zinc-finger double domain
  224-246 Zinc finger, C2H2 type
  224-244 C2H2-type zinc finger
  239-263 Zinc-finger double domain
  252-274 Zinc-finger double-stranded RNA-binding
  252-274 Zinc-finger of C2H2 type
  252-274 Zinc finger, C2H2 type
  252-274 C2H2-type zinc finger
Sequence: 
(in bold interface residues)		   1 MAAARPEAQSRSSPTPESRSQEPLDLVLVPDDCRPGTPPSDLIEIQVVKVTDTTLVPEPP   60
  61 EPGSFHCALCPAAFRLVSELLFHEHGHLAGAEGGGQGGDPSRCHVCGHSCPGPASLRAHY  120
 121 SLHTGERPYRCALCPRAFKALAPLLRHQHRHGVEPGTSRRPPDTAAVAEQRPGVAPERAE  180
 181 VVMAAAAAGAAVGKPFACRFCAKPFRRSSDMRDHERVHTGERPYHCGICGKGFTQSSVLS  240
 241 GHARIHTGERPFRCTLCDRTFNNSSNFRKHQRTHFHGPGPGLGDSGGQLGSSAAEGSGSG  300
 301 CGVGDPAEEGRGETAKVKVEADQ*
Interface Residues: 76, 78, 79, 82, 112, 114, 115, 118, 139, 140, 141, 142, 143, 146, 162, 163, 164, 170, 172, 173, 174, 177, 179, 181, 186, 187, 188, 189, 190, 192, 196, 205, 206, 207, 208, 209, 210, 212, 213, 214, 215, 216, 219, 234, 235, 236, 237, 238, 239, 240, 241, 242, 245, 248, 249, 262, 263, 264, 265, 266, 268, 269
3D-footprint Homologues: 8ssu_A, 8ssq_A, 7w1m_H, 5und_A, 2i13_A, 5yel_A, 6ml4_A, 5v3j_F, 5ei9_F, 2gli_A, 2kmk_A, 8gn3_A, 6jnm_A, 7n5w_A, 1tf3_A, 1tf6_A, 1llm_D, 7eyi_G, 1ubd_C, 4x9j_A, 1mey_C, 6blw_A, 5kkq_D, 6u9q_A, 5kl3_A, 7ysf_A, 1g2f_F, 6wmi_A, 5k5i_A, 4m9v_C, 8h9h_G, 2lt7_A, 7y3m_I, 6e94_A, 6a57_A, 2jpa_A, 8cuc_F, 7y3l_A, 3uk3_C, 5k5l_F, 2wbs_A, 1f2i_J, 7txc_E, 1yuj_A, 2drp_D, 5yj3_D
Binding Motifs: ZNF784_full GTACCTACCT
			
Publications: Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]
Related annotations: PaperBLAST

	
			


			

				

				
				
				
				

			

			

		

	
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