Transcription Factor
| Accessions: | 1ynw_A (3D-footprint 20231221) |
| Names: | 1,25-dihydroxyvitamin D3 receptor, Nuclear receptor subfamily 1 group I member 1, VDR_HUMAN, Vitamin D3 Receptor |
| Organisms: | Homo sapiens |
| Libraries: | 3D-footprint 20231221 1 1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed] |
| Uniprot: | P11473 |
| Length: | 96 |
| Pfam Domains: | 6-74 Zinc finger, C4 type (two domains) |
| Sequence: (in bold interface residues) | 1 RNVPRICGVCGDRATGFHFNAMTCEGCKGFFRRSMKRKALFTCAANGDCRITKDNRRACQ 60 61 ACRLKRCVDIGMMKEFILTDEEVQRKREMILKRKEE |
| Interface Residues: | 15, 16, 18, 19, 25, 26, 28, 29, 32, 33, 57, 86, 87 |
| 3D-footprint Homologues: | 6fbq_A, 7wnh_D, 6l6q_B, 3g9m_B, 1a6y_A, 1lo1_A, 4oln_B, 2han_B, 1kb2_B, 2a66_A, 2nll_B, 1lat_A, 7xv6_B, 2ff0_A, 1dsz_A, 4umm_E, 3cbb_A, 8cef_H, 4iqr_B, 2han_A, 1hcq_E, 8hbm_B, 5krb_G, 5cbz_E, 4tnt_B, 5e69_A, 4hn5_B, 5emc_A, 7prw_B, 5cbx_B, 3g6t_A, 1r4i_A |
| Binding Motifs: | 1ynw_AB TGACCnnnnTGnCC |
| Publications: | Shaffer P.L, Gewirth D.T. Structural analysis of RXR-VDR interactions on DR3 DNA. The Journal of steroid biochemistry and molecular biology 89-90:215-9 (2004). [Pubmed] |
| Related annotations: | PaperBLAST |
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