Transcription Factor
| Accessions: | T057683_1.02 (CISBP 1.02) |
| Names: | sr, T057683_1.02; |
| Organisms: | Drosophila melanogaster |
| Libraries: | CISBP 1.02 1 1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed] |
| Notes: | experiment type:B1H, family:C2H2 ZF |
| Length: | 717 |
| Pfam Domains: | 567-591 C2H2-type zinc finger 567-591 Zinc finger, C2H2 type 584-607 Zinc-finger double domain 597-619 C2H2-type zinc finger 597-619 Zinc finger, C2H2 type 611-635 Zinc-finger double domain 625-647 C2H2-type zinc finger 625-647 Zinc finger, C2H2 type |
| Sequence: (in bold interface residues) | 1 MIMEGLETLVAPTHHAFLLTETAAAAHFNVLSFDTCLFKTSTAAQSSGSPSTATYLSPAQ 60 61 FGGSHHGGASTSSNSLNSSSTASSSSTSSSLLHYTTASAAAAAAAAAAASANNSVLRARN 120 121 QTATPTQGGSPGHVAVQPSATASSGRSSASHLSLLNTSGQHSPTSSAVEQVEAHKQLIEA 180 181 LPGDLNTPVTTSSDIPSFFGPTTVVEPPPITGSIESEDLSLEPQVISVASPVLSHCSPLK 240 241 EERSTPPALAIVKEESSNAMNAAAAAAAAAAQQQHQQQQQHQQQLPSPQLGVLAGPMSPP 300 301 SNSLGNSWGLPSPDKTMFQPPLFSLPAHYATMQQQQQQQQQQQQQQQQQQAAGAAPSPYD 360 361 DGRAAAAAAAQHAELLGLTMDCTPLLLKQPPPSYAGASAGFPGLGDLHSSHEQQLQQQQY 420 421 VRSQPKYQWLDSPADYAQQQQQVQQVQQQQQQQQTLVLPGPTSSASSSNAALGVLIPKQE 480 481 NYPDMQPSSNGTGYSGGSGGSSAAAAAAAAAAAAAVQLAEYSPSTSKGHEILSQVYQQST 540 541 VPLKLVPVKPRKYPNRPSKTPVHERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCR 600 601 ICMRSFSRSDHLTTHIRTHTGEKPFSCDICGRKFARSDEKKRHAKVHLKQRIKKEKVRGE 660 661 QQQQQQQQQQQQQQQQQQQLQQQQEQHHLSLQQHQQYQQHHLLHSADLAIVTSSASM |
| Interface Residues: | 549, 553, 556, 558, 559, 562, 579, 580, 581, 582, 583, 585, 586, 607, 608, 609, 610, 611, 612, 613, 614, 615, 635, 636, 637, 638, 639, 640, 641, 642, 643, 646 |
| 3D-footprint Homologues: | 8ssq_A, 7w1m_H, 8ssu_A, 6blw_A, 5ei9_F, 7ysf_A, 2jpa_A, 1tf3_A, 7n5w_A, 6jnm_A, 1ubd_C, 2kmk_A, 6u9q_A, 5yel_A, 5kkq_D, 4x9j_A, 2gli_A, 1f2i_J, 5kl3_A, 2wbs_A, 1tf6_A, 1g2f_F, 6ml4_A, 5v3j_F, 8h9h_G, 6e94_A, 2lt7_A, 6a57_A, 3uk3_C, 8cuc_F, 7y3l_A, 5k5i_A, 1llm_D, 2drp_D, 8gn3_A, 7txc_E, 4m9v_C, 7y3m_I, 5yj3_D |
| Binding Motifs: | M5215_1.02 kkrbGkGGGCGkkd |
| Related annotations: | PaperBLAST |
Disclaimer and license
These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.