Transcription Factor
| Accessions: | NANOG_HUMAN (HOCOMOCO 10) |
| Names: | hNanog, Homeobox protein NANOG, Homeobox transcription factor Nanog, NANOG_HUMAN |
| Organisms: | Homo sapiens |
| Libraries: | HOCOMOCO 10 1 1 Kulakovskiy IV, Vorontsov IE, Yevshin IS, Soboleva AV, Kasianov AS, Ashoor H, Ba-Alawi W, Bajic VB, Medvedeva YA, Kolpakov FA, Makeev VJ. HOCOMOCO: expansion and enhancement of the collection of transcription factor binding sites models. Nucleic Acids Res : (2016). [Pubmed] |
| Length: | 305 |
| Pfam Domains: | 97-152 Homeobox domain |
| Sequence: (in bold interface residues) | 1 MSVDPACPQSLPCFEASDCKESSPMPVICGPEENYPSLQMSSAEMPHTETVSPLPSSMDL 60 61 LIQDSPDSSTSPKGKQPTSAEKSVAKKEDKVPVKKQKTRTVFSSTQLCVLNDRFQRQKYL 120 121 SLQQMQELSNILNLSYKQVKTWFQNQRMKSKRWQKNNWPKNSNGVTQKASAPTYPSLYSS 180 181 YHQGCLVNPTGNLPMWSNQTWNNSTWSNQTQNIQSWSNHSWNTQTWCTQSWNNQAWNSPF 240 241 YNCGEESLQSCMQFQPNSPASDLEAALEAAGEGLNVIQQTTRYFSTPQTMDLFLNYSMNM 300 301 QPEDV |
| Interface Residues: | 96, 97, 98, 99, 137, 138, 140, 141, 144, 145, 148, 149, 152, 171 |
| 3D-footprint Homologues: | 6a8r_A, 2h1k_B, 1puf_A, 1fjl_B, 3cmy_A, 5zfz_A, 1ig7_A, 3d1n_M, 1zq3_P, 1jgg_B, 1nk2_P, 3lnq_A, 2lkx_A, 2ld5_A, 7q3o_C, 6es3_K, 7psx_B, 5hod_A, 3a01_E, 1au7_A, 5jlw_D, 4xrs_G, 2hdd_A, 1b72_A, 3rkq_B, 2r5y_A, 1puf_B, 6m3d_C, 5flv_I, 2hos_A, 5zjt_E, 4cyc_A, 1e3o_C, 1le8_A, 7xrc_C, 2xsd_C, 3l1p_A, 4qtr_D, 1k61_B, 1mnm_C, 8g87_X, 1du0_A |
| Binding Motifs: | NANOG_HUMAN.H10MO.A|M01349 yywTTswtATGywaAtk |
| Related annotations: | PaperBLAST |
Disclaimer and license
These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.