Transcription Factor

						

			
Accessions: 1qrv_A (3D-footprint 20231221)

			
Names: HIGH MOBILITY GROUP PROTEIN D, HMG-D, HMGD_DROME
Organisms: Drosophila melanogaster
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Uniprot: Q05783
Length: 73
Pfam Domains:      2-64 Domain of unknown function (DUF1898)
     4-69 HMG (high mobility group) box
Sequence: 
(in bold interface residues)		   1 SDKPKRPLSAYMLWLNSARESIKRENPGIKVTEVAKRGGELWRAMKDKSEWEAKAAKAKD   60
  61 DYDRAVKEFEANG
Interface Residues: 6, 9, 11, 12, 15, 19, 30, 31, 32, 35
3D-footprint Homologues: 3tmm_A, 4y60_C, 2gzk_A, 1j5n_A, 6jrp_D, 2lef_A, 3u2b_C, 1o4x_B, 7m5w_A, 3f27_D, 4s2q_D, 1qrv_A, 1hry_A, 3tq6_B, 1ckt_A
Binding Motifs: 1qrv_A gATAnc
1qrv_AB tATcnC
Binding Sites: 1qrv_C
1qrv_D
			
Publications: Murphy F.V, Sweet R.M, Churchill M.E. The structure of a chromosomal high mobility group protein-DNA complex reveals sequence-neutral mechanisms important for non-sequence-specific DNA recognition. The EMBO journal 18:6610-8 (1999). [Pubmed]
Related annotations: PaperBLAST

	
			


			

				

				
				
				
				

			

			

		

	
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