Transcription Factor
| Accessions: | T126161_1.02 (CISBP 1.02) |
| Names: | GSPATP00011874001, T126161_1.02; |
| Organisms: | Paramecium tetraurelia |
| Libraries: | CISBP 1.02 1 1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed] |
| Notes: | experiment type:PBM, family:Myb/SANT |
| Length: | 177 |
| Pfam Domains: | 56-100 Myb-like DNA-binding domain 58-101 Myb-like DNA-binding domain |
| Sequence: (in bold interface residues) | 1 MSSQEQEIDKELDQEQENGCDQEDQEEQDRTLSGKKKQTKKYERITEGLSNRKPGQKFTP 60 61 EEDRLILELVQSIGPKFQKIHKHFPGKTLAMVKNRYYKYLRYRWEVLDQQNNITEQNKET 120 121 NKQNHHSNESYEILCEKQKKISSLLHQERNDLVNSIAQRASTPNAKIFVEYLIDQML |
| Interface Residues: | 36, 37, 38, 40, 41, 44, 53, 55, 56, 89, 90, 93, 94, 97, 98, 99 |
| 3D-footprint Homologues: | 5b7j_A, 2kdz_A, 3zqc_A, 7xur_A, 1mse_C, 6kks_A, 3osg_A |
| Binding Motifs: | M1398_1.02 kyAGTTCCta |
| Related annotations: | PaperBLAST |
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