Transcription Factor
| Accessions: | MEF2A_MOUSE (HOCOMOCO 10) |
| Names: | MEF2A_MOUSE |
| Organisms: | Mus musculus |
| Libraries: | HOCOMOCO 10 1 1 Kulakovskiy IV, Vorontsov IE, Yevshin IS, Soboleva AV, Kasianov AS, Ashoor H, Ba-Alawi W, Bajic VB, Medvedeva YA, Kolpakov FA, Makeev VJ. HOCOMOCO: expansion and enhancement of the collection of transcription factor binding sites models. Nucleic Acids Res : (2016). [Pubmed] |
| Uniprot: | Q60929 |
| Length: | 498 |
| Pfam Domains: | 10-59 SRF-type transcription factor (DNA-binding and dimerisation domain) 95-152 Holliday junction regulator protein family C-terminal repeat |
| Sequence: (in bold interface residues) | 1 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSSNKLFQYAST 60 61 DMDKVLLKYTEYNEPHESRTNSDIVETLRKKGLNGCESPDADDYFEHSPLSEDRFSKLNE 120 121 DSDFIFKRGPPGLPPQNFSMSVTVPVTSPNALSYTNPGSSLVSPSLAASSTLADSSMLSP 180 181 PPATLHRNVSPGAPQRPPSTGSASGMLSTTDLTVPNGAGNSPVGNGFVNSRASPNLIGNT 240 241 GANSLGKVMPTKSPPPPGGGSLGMNSRKPDLRVVIPPSSKGMMPPLSEEEELELNAQRIS 300 301 SSQATQPLATPVVSVTTPSLPPQGLVYSAMPTAYNTDYSLTSADLSALQGFTSPGMLSLG 360 361 QASAWQQHHLGQAALSSLVAGGQLSQGSNLSINTNQNINIKSEPISPPRDRMTPSGFQQQ 420 421 QQQPQQQPPPQPPQPQPRQEMGRSPVDSLSSSSSSYDGSDREDPRGDFHSPIVLGRPPNT 480 481 EDRESPSVKRMRMDTWVT |
| Interface Residues: | 3, 4, 15, 18, 19, 23, 93, 272, 274 |
| 3D-footprint Homologues: | 8q9r_F, 8q9n_B, 1c7u_A, 1n6j_A, 8q9p_B, 1egw_B, 8q9q_A, 1hbx_A, 7xuz_H, 1mnm_A, 6fas_B |
| Binding Motifs: | MEF2A_MOUSE.H10MO.B|M01205 rdkCTATTTwTAGm |
| Related annotations: | PaperBLAST |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.