Transcription Factor
| Accessions: | THX20 (EEADannot 2026-03-04) |
| Names: | ZmMYB175;ZmTHX20;Zm00001eb248900_P001 |
| Organisms: | Zea mays |
| Libraries: | EEADannot 2026-03-04 1 1 Contreras-Moreira B, Sebastian A. FootprintDB: Analysis of Plant Cis-Regulatory Elements, Transcription Factors, and Binding Interfaces. Methods Mol Biol 1482:259-77 (2016) [Pubmed] |
| Notes: | family:null |
| Length: | 672 |
| Pfam Domains: | 99-185 Myb/SANT-like DNA-binding domain 412-499 Myb/SANT-like DNA-binding domain |
| Sequence: (in bold interface residues) | 1 MLHHHGGAGSPYMAPTTADTGMDPFSPTPATRPAVSVTAIPPPPTMQLRPAGAGPSADFE 60 61 ELPAGGAGAGAAASLQDDDMQMQADYGASAAGASGSGGNRWPREETLALIRIRTEMDADF 120 121 RNAPLKAPLWEDVARKLAGLGYHRSAKKCKEKFENVHKYYKRTKDAHAGRQDGKSYRFFS 180 181 QLEALHAAAPQPQPPSGMTTVQAGPHHPMALAWTAGPTALGPAAGAGLPDLSFSSMSGSE 240 241 SEYDSDDDDDDDAGEEGLGRGEYHREMMAIFEGMMKQVTDKQDAMQRVFLETLERWEAER 300 301 TAREEAWRRQEVARMNRERERLARERAAAASRDAALIAFLQCVGGGQGQPVRLPPHSAGA 360 361 SVVPAPPKPDCAPPSPRLDAAATSLQQLVPAQLKAVEALAWAGGEGGGSTSSRWPKEEVE 420 421 ALIQVRNEKDEQYHDAGGKGPLWEDIAAGMRRIGYNRSAKRCKEKWENINKYYKKVKESN 480 481 KRRPEDSKTCPYFHQLDAMYRKKHRGDRGRITAAGPNMQDSPSQRELEGKSSNDVDIDNR 540 541 KSDEQGNVHTSPVSGNRDTAPTTTRPPGDGAKNKTAEDNLKRTNVQLKQQQHEFGTDETD 600 601 SDDDMARNHTAYTEEDDDEAKIKYKMDFQNPNMIGSSSNMSAPPPPAAAAATTAAAPTTS 660 661 AAPTSNTFLAVQ |
| Interface Residues: | 460, 463, 464, 480 |
| 3D-footprint Homologues: | 3osg_A, 1z19_B |
| Binding Motifs: | EEAD0530 ATTTACCGTyA EEAD0531 CGGTAAATAGTAACG |
| Related annotations: | PaperBLAST |
Disclaimer and license
These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.