Transcription Factor

Accessions: T025918_1.02 (CISBP 1.02)
Names: T025918_1.02;, Tef
Organisms: Mus musculus
Libraries: CISBP 1.02 1
1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed]
Notes: experiment type:PBM, family:bZIP
Length: 285
Pfam Domains: 214-267 Basic region leucine zipper
215-274 bZIP transcription factor
Sequence:
(in bold interface residues)
1 MSSCSQIGVAPAMDMPEVLKSLLEHSLPWSEKKADKEKGKEKLEEDESAAASTMAVSASL 60
61 MPPIWDKTIPYDGESFHLEYMDLDEFLLENGIPASPTHLAQNLLLPVAELEGKESASSST 120
121 ASPPSSSTAIFQPSETVSSTESSLEKERETPSPIDPSCVEVDVNFNPDPADLVLSSVPGG 180
181 ELFNPRKHRFAEEDLKPQPMIKKAKKVFVPDEQKDEKYWTRRKKNNVAAKRSRDARRLKE 240
241 NQITIRAAFLEKENTALRTEVAELRKEVGKCKTIVSKYETKYGPL
Interface Residues: 221, 222, 225, 226, 228, 229, 230, 232, 233, 234
3D-footprint Homologues: 2wt7_A, 4eot_A, 6mg1_B, 1nwq_C
Binding Motifs: M0293_1.02 krTTayryaa
Related annotations: PaperBLAST

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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.