Transcription Factor
| Accessions: | 6jgx_B (3D-footprint 20231221) |
| Names: | CadR, Cd(II, Q93TP7_PSEPU |
| Organisms: | Pseudomonas putida |
| Libraries: | 3D-footprint 20231221 1 1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed] |
| Uniprot: | Q93TP7 |
| Length: | 136 |
| Pfam Domains: | 1-68 MerR HTH family regulatory protein 2-39 MerR family regulatory protein 44-108 MerR, DNA binding |
| Sequence: (in bold interface residues) | 1 MKIGELAKATDCAVETIRYYEREQLLPEPARSDGNYRLYTQAHVERLTFIRNCRTLDMTL 60 61 DEIRSLLRLRDSPDDSCGSVNALIDEHIEHVQARIDGLVALQEQLVELRRRCNAQGAECA 120 121 ILQQLETNGAVSVPET |
| Interface Residues: | 15, 18, 19, 22, 23, 36, 37 |
| 3D-footprint Homologues: | 7ckq_G, 4r4e_B, 6ldi_G, 2vz4_A, 7tea_B, 5c8e_C, 6xh7_H, 2zhg_A, 7tec_A, 1r8d_B, 6xl5_H, 4r24_B, 6jgx_B, 1r8e_A, 5d8c_A |
| Binding Motifs: | 6jgx_AB CncTnnnGCnACnanAgnG 6jgx_B cncTntnGT |
| Binding Sites: | 6jgx_C 6jgx_D |
| Publications: | Liu X, Hu Q, Yang J, Huang S, Wei T, Chen W, He Y, Wang D, Liu Z, Wang K, Gan J, Chen H. Selective cadmium regulation mediated by a cooperative binding mechanism in CadR. Proc Natl Acad Sci U S A 116:20398-20403 (2019). [Pubmed] |
| Related annotations: | PaperBLAST |
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