Transcription Factor

						

			
Accessions: T057696_1.02 (CISBP 1.02)

			
Names: bowl, T057696_1.02;
Organisms: Drosophila melanogaster
Libraries: CISBP 1.02 1
1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed]
Notes: experiment type:B1H, family:C2H2 ZF
Length: 744
Pfam Domains:   238-260 Zinc finger, C2H2 type
  238-260 C2H2-type zinc finger
  238-255 C2H2-type zinc finger
  252-276 Zinc-finger double domain
  266-286 C2H2-type zinc finger
  266-288 Zinc finger, C2H2 type
  266-288 C2H2-type zinc finger
  280-303 Zinc-finger double domain
  294-317 C2H2-type zinc finger
  310-332 Zinc-finger double domain
  321-340 C2H2-type zinc finger
  322-344 Zinc finger, C2H2 type
  322-344 C2H2-type zinc finger
  336-360 Zinc-finger double domain
  349-360 C2H2-type zinc finger
  350-372 Zinc finger, C2H2 type
  350-372 C2H2-type zinc finger
Sequence: 
(in bold interface residues)		   1 MPTESSSSEISGGGGGAIPMLRPSRMDQFMNSMAAAAAAVGGGGLPGAADRNGGSGGSDG   60
  61 GSQNGNGDSRNSSASRISAYETQLAYQQHLAGLHGPPPPPPPSHHREISAFVPVLPTGKV  120
 121 RPGSNSNYEIIAMMADKRKELALREAAAAAAMLGRGPGGPGGPGVPPPGVLYGPAGVPPP  180
 181 PYLTGPGPSPTGAGSFPFPPGAAAAALFPPGLGPGMHAGLDRRLLRAPGRASRPKKQFIC  240
 241 KFCNRQFTKSYNLLIHERTHTDERPYSCDICGKAFRRQDHLRDHRYIHSKEKPFKCTECG  300
 301 KGFCQSRTLAVHKILHMEESPHKCPVCSRSFNQRSNLKTHLLTHTDHKPYECSSCGKVFR  360
 361 RNCDLRRHALTHAVGEVNSGDYVDVGEEDEARNLSGDEEDSLLEVDSPRQSPVHNLGESG  420
 421 GSGEKSESERMRLKRKAAIDHEESEEEFDDFDEEEELQDLPRVHDLPREEDDDFDPEDEE  480
 481 QAEVALVARFQASKAAATSQSSSSVGTKPERQGVTHCHHEGGETYTMRPHGEKHQEEPGN  540
 541 SGIASLPVPPSFVRYSVPPGAAGPPPAPPGAPPPTHQHPGHPHLLPPNGDPYLPILHVRR  600
 601 DLHHKSLNLSKAGVPPPPHTPPTIITQPESGKPPNQPLHSPHEAMPSFLGSIPMRKRILP  660
 661 APTLDLMDPHHHPGLGQRTFVDSPSIYALNMSRHPPRQLLGKPPSTETSGATTEKGPPVA  720
 721 APPIAPPPAPPRRTGFSIEDIMRR
Interface Residues: 248, 249, 250, 251, 252, 254, 255, 256, 257, 258, 261, 266, 276, 277, 278, 279, 280, 281, 282, 283, 284, 287, 304, 305, 306, 307, 308, 310, 311, 313, 314, 319, 332, 333, 334, 335, 336, 337, 338, 339, 360, 361, 362, 363, 364, 366, 367, 368
3D-footprint Homologues: 1tf3_A, 3uk3_C, 8cuc_F, 7y3l_A, 5v3j_F, 7n5w_A, 6blw_A, 5kkq_D, 6u9q_A, 5yel_A, 4x9j_A, 5kl3_A, 1f2i_J, 6wmi_A, 5ei9_F, 7w1m_H, 5und_A, 1g2f_F, 1tf6_A, 6ml4_A, 2gli_A, 1llm_D, 8h9h_G, 7eyi_G, 4m9v_C, 7y3m_I, 2i13_A, 6e94_A, 7ysf_A, 2jpa_A, 1ubd_C, 2kmk_A, 7txc_E, 2wbs_A, 8ssq_A, 5k5i_A, 2lt7_A, 6jnm_A, 1mey_C, 6a57_A, 1yuj_A, 2drp_D, 8gn3_A, 5yj3_D
Binding Motifs: M4769_1.02 mCrGwAGY
			
Related annotations: PaperBLAST

	
			


			

				

				
				
				
				

			

			

		

	
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