Transcription Factor
| Accessions: | 1d5y_A (3D-footprint 20231221), 1d5y_B (3D-footprint 20231221), 1d5y_C (3D-footprint 20231221), 1d5y_D (3D-footprint 20231221) |
| Names: | ROB TRANSCRIPTION FACTOR, ROB_ECOLI |
| Organisms: | Escherichia coli, strain K12 |
| Libraries: | 3D-footprint 20231221 1 1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed] |
| Uniprot: | P0ACI0 |
| Length: | 288 |
| Pfam Domains: | 25-103 Helix-turn-helix domain 67-103 Bacterial regulatory helix-turn-helix proteins, AraC family 125-282 GyrI-like small molecule binding domain |
| Sequence: (in bold interface residues) | 1 QAGIIRDLLIWLEGHLDQPLSLDNVAAKAGYSKWHLQRMFKDVTGHAIGAYIRARRLSKS 60 61 AVALRLTARPILDIALQYRFDSQQTFTRAFKKQFAQTPALYRRSPEWSAFGIRPPLRLGE 120 121 FTMPEHKFVTLEDTPLIGVTQSYSCSLEQISDFRHEMRYQFWHDFLGNAPTIPPVLYGLN 180 181 ETRPSQDKDDEQEVFYTTALAQDQADGYVLTGHPVMLQGGEYVMFTYEGLGTGVQEFILT 240 241 VYGTCMPMLNLTRRKGQDIERYYPAEDDRPINLRCELLIPIRRKLAAA |
| Interface Residues: | 32, 33, 34, 35, 37, 38, 41, 49, 83, 84, 87, 88, 92 |
| 3D-footprint Homologues: | 3w6v_A, 7vwz_G, 1zgw_A, 1xs9_A |
| Binding Motifs: | 1d5y_A gTGCtg 1d5y_AB caGCAc 1d5y_CD caGCAC |
| Binding Sites: | 1d5y_M / 1d5y_O 1d5y_N / 1d5y_P |
| Publications: | Kwon HJ., Bennik MH., Demple B., Ellenberger T. Crystal structure of the Escherichia coli Rob transcription factor in complex with DNA. Nat Struct Biol. 7(5):424-30 (2000). [Pubmed] |
| Related annotations: | PaperBLAST |
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