Transcription Factor

						

			
Accessions: Solyc10g005080.3.1 (EEADannot 2026-03-04)

			
Names: LHY
Organisms: Solanum lycopersicum
Libraries: EEADannot 2026-03-04 1
1 Contreras-Moreira B, Sebastian A. FootprintDB: Analysis of Plant Cis-Regulatory Elements, Transcription Factors, and Binding Interfaces. Methods Mol Biol 1482:259-77 (2016) [Pubmed]
Notes: family:MYBRELATED
Length: 762
Pfam Domains:     24-68 Myb-like DNA-binding domain
Sequence: 
(in bold interface residues)		   1 MDPYSSGEELVVKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQ   60
  61 IRSHAQKFFTKLEKEALTKGVPTSQALDIEIPPPRPKRKPSNPYPRKTSAAGHSSQVGAK  120
 121 DGKYSTTFSSICEERNLFDLEKEPITEKPGGNEKLGNVKETQNKKNCSQGLTKEGASAAS  180
 181 MSSGKSLQAHVAPTDVCAFSESVSVTKGVVNNDNANKSFLIVESKEHQQSEILDIRQSFQ  240
 241 GNSSCNTFDGGKSCQSSEKLAQGEKKHPSFQPNHLGEFSRNDMQVLHNYPRHVPVHILDG  300
 301 TNGSQIAPDMFNHESTSQQINGVPGLPNLYSNPASSTTSEHHSNAPQSSIHQSFSCFHPI  360
 361 FTPIRDPDDYRSFFQLSSTFSSLIVSALLQNPAAHVAASFAASFWPYANMERPTDSPTDN  420
 421 TASQINSAPSMAAIAAATVAAATAWWAAHGLLPLCSQFQSSFTCVPTSATSMQVDACQPR  480
 481 VDKNEGREGTHDSPHVQEPVPECSEALQEQQSGSKLPPSLSSESEESEGRKLKTGLTATD  540
 541 TEQGAAVTKINEPNAEKGGKQVDRSSCGSNTPSSSEIETDALEKDEKGKEEPQESNINLL  600
 601 AGEAANRRYRNFISPTESWKEVSEEGRIAFQALFTREVLPQSFSPSLDLKNKGKIILEKL  660
 661 KQKPDEKVQCGPQLDLNDMASNICSSHQTMEDNVLLIGNKEDVETCLPMIELGQVRLKAR  720
 721 RTGFKPYKRCSLEANDSRVTSSNCQDEEKSSKRLRLEGEAST
Interface Residues: 24, 58, 59, 62, 63, 66, 67
3D-footprint Homologues: 7d3t_D, 6j5b_C, 1mse_C, 3osg_A
Binding Motifs: EEAD0658 AAATATCy
			
Related annotations: PaperBLAST

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.