Transcription Factor
| Accessions: | T104290_1.02 (CISBP 1.02) |
| Names: | Q91926, T104290_1.02; |
| Organisms: | Xenopus laevis, Xenopus sp. |
| Libraries: | CISBP 1.02 1 1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed] |
| Notes: | family:Homeodomain |
| Length: | 264 |
| Pfam Domains: | 130-186 Homeobox domain |
| Sequence: (in bold interface residues) | 1 MVQQGFSIDLILARSKEEATDGKDSMSSRPHIPCAPQPLPPTKYAKEMPRKKDGQDVQEH 60 61 TTSFQCSLGEQVINRPSANPSLAAMHRSSGSSDEFSPPGSEDDSTESSGRSSQENDTEQR 120 121 EKSPKSDLQRRLRTAFTPQQISKLEQAFNKQRYLGAPERKKLATSLQLSEIQVKTWFQNR 180 181 RMKLKRQIQDKQHSLVPPPVCYPQTFPYYPGGFPVPLNSGSFYQPRALPFQAPQHSYIPQ 240 241 PLHHHVRMSSHQEQYPPLFGAQYM |
| Interface Residues: | 129, 130, 131, 132, 133, 171, 172, 174, 175, 178, 179, 182, 183, 186 |
| 3D-footprint Homologues: | 4j19_B, 3d1n_M, 5zfz_A, 6fqp_B, 1fjl_B, 2h1k_B, 1puf_A, 6a8r_A, 3cmy_A, 1jgg_B, 1zq3_P, 3lnq_A, 1nk2_P, 2lkx_A, 6es3_K, 7q3o_C, 2ld5_A, 2r5y_A, 1puf_B, 4xrs_G, 2hos_A, 5flv_I, 5zjt_E, 3a01_E, 6m3d_C, 1au7_A, 5hod_A, 3rkq_B, 1ig7_A, 2hdd_A, 7psx_B, 1b72_A, 5jlw_D, 4cyc_A, 2xsd_C, 7xrc_C, 1le8_A, 1mnm_C, 1du0_A, 1k61_B, 4qtr_D, 4xrm_B, 1le8_B |
| Binding Motifs: | M4106_1.02 rsrMAAATwgsvs |
| Related annotations: | PaperBLAST |
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