Transcription Factor

						

			
Accessions: T125951_1.02 (CISBP 1.02)

			
Names: estExt_fgenesh1_pg.C_Chr_03.00010061, T125951_1.02;
Organisms: Ostreococcus tauri
Libraries: CISBP 1.02 1
1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed]
Notes: experiment type:PBM, family:Myb/SANT
Length: 499
Pfam Domains:   402-451 Myb-like DNA-binding domain
Sequence: 
(in bold interface residues)		   1 MSVVQTPGSRVVPSRHLRRDGAPAAVRSYRFPNGTDLHGDEEGSSFMADPIDAAGLERAF   60
  61 ASDPVLKEAEREILSKTNAQRIAAAERGALLEHGKQFDSMLGMKTIYSSGSGASDDDDKA  120
 121 STQSVAYLYPGIDGASNRSYSPFDLTLDEAAENLLCDFGAPNIDGAYGLIDDDGSEIFVQ  180
 181 HTAPPLSAWMSNGNLCGLDAPPGHEPAWASGGRSEAYEHIPAVVEFGVPGHTEVESIASL  240
 241 RAQYRALFGKDTNSNNRQWIIKRLEAFRNGDDLTPPSSRYSSPLSGEDTYVGGARFKQSV  300
 301 SSPKRAAGKRQVKSARSLYDEEVDEHESARRGAVKGRGKVVKGKRVAEASLPKSNTKKAK  360
 361 SVSDAESADGSSAKGGARGTARPAARSKQGENGTGRRSKHHNPWALEEAEALVRGVAQCG  420
 421 GGKWADIKKLGFPAIEHRTAVDLKDKWRNLLRIAMLPAQSVKTVGDKKREIPQELLAKVR  480
 481 ELAAKQAKAKAAMEAARGR
Interface Residues: 440, 441, 444, 445, 448, 449
3D-footprint Homologues: 1vfc_A, 1w0t_A, 2qhb_A, 1mse_C, 7c4r_A
Binding Motifs: M1394_1.02 wwrmCCYar
			
Related annotations: PaperBLAST

	
			


			

				

				
				
				
				

			

			

		

	
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