Transcription Factor

						

			
Accessions: AtMYB94 (AthaMYB 1.0)

			
Names: AtMYB94, MYB transcription factor, Putative transcription factor MYB94
Organisms: Arabidopsis thaliana
Libraries: AthaMYB 1.0 1
1 Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). [Pubmed]
Uniprot: Q9SN78
Length: 334
Pfam Domains:     14-61 Myb-like DNA-binding domain
    17-76 Myb-like DNA-binding domain
   67-112 Myb-like DNA-binding domain
   70-120 Myb-like DNA-binding domain
Sequence: 
(in bold interface residues)		   1 MGRPPCCDKIGVKKGPWTPEEDIILVSYIQEHGPGNWRSVPTHTGLRRCSKSCRLRWTNY   60
  61 LRPGIKRGNFTEHEEKMILHLQALLGNRWAAIASYLPERTDNDIKNYWNTHLKKKLKKMN  120
 121 DSCDSTINNGLDNKDFSISNKNTTSHQSSNSSKGQWERRLQTDINMAKQALCDALSIDKP  180
 181 QNPTNFSIPDLGYGPSSSSSSTTTTTTTTRNTNPYPSGVYASSAENIARLLQNFMKDTPK  240
 241 TSVPLPVAATEMAITTAASSPSTTEGDGEGIDHSLFSFNSIDEAEEKPKLIDHDINGLIT  300
 301 QGSLSLFEKWLFDEQSHDMIINNMSLEGQEVLF*
Interface Residues: 14, 49, 50, 51, 52, 54, 55, 58, 59, 60, 67, 101, 102, 103, 105, 106, 109, 110, 111
3D-footprint Homologues: 3osg_A, 1vfc_A, 1w0t_A, 2kdz_A, 7xur_A, 1mse_C, 3zqc_A, 5eyb_B, 6kks_A, 1ign_A
Binding Motifs: AtMYB94_I ddMdGTTr
AtMYB94_II GtTAGTTG
Binding Sites: GTTAGTTA
AAAAGTTA
GACAGTTG
GCTTGTTG
GGTAGGTG
GTCAGTTA
GTTAGTTG
TACTGTTG
TGCGGTTG
			
Publications: Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). [Pubmed]
Related annotations: PaperBLAST

	
			


			

				

				
				
				
				

			

			

		

	
Disclaimer and license


These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.