Transcription Factor
| Accessions: | T148746_1.02 (CISBP 1.02), Q9ASZ1 (JASPAR 2024) |
| Names: | AT4G00270, T148746_1.02;, GLABROUS1 enhancer-binding protein, Probable transcription factor At4g00270, Protein GeBP, Protein STOREKEEPER RELATED 1, STKLO_ARATH, Storekeeper-like protein At4g00270 |
| Organisms: | Arabidopsis thaliana |
| Libraries: | CISBP 1.02 1, JASPAR 2024 2 1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed] 2 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Notes: | experiment type:PBM, family:Storekeeper |
| Length: | 302 |
| Pfam Domains: | 64-159 Protein of unknown function, DUF573 |
| Sequence: (in bold interface residues) | 1 MVTPKQIDFSSCVGADNSNGTLSHRRSPRNIPSSKRAASVAEEETMKKKMKMKKKKKKLD 60 61 PPLIVRIWNEEDELSILKGLVDYRAKTGFNPKIDWDAFCSFLGSSIVERFSKDQVLSKIR 120 121 KLKRRFHVHSEKINQGNDPKFTRSSDSEAFGFSSMIWGQGDDDGMDKEHEVNGNGAAENR 180 181 TNESGEEMLKEHEEEVANTELLNENGAAKTTENGTSSGKERHDEDNDDDDELCAVQDAFE 240 241 AVMSQGLSGYQKKLQLEKLMNLGNGKRRELSDEWKALCVEETRFNIKKLRFSAKLAEAAN 300 301 DS |
| Interface Residues: | 30, 275, 278, 279, 282, 283 |
| 3D-footprint Homologues: | 3k59_A, 6lxn_A |
| Binding Motifs: | M1620_1.02 cCGGCCGc UN0399.1 gCGGCCGg |
| Related annotations: | PaperBLAST |
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